Chelonia mydas (green sea turtle): 102934100
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Entry
102934100 CDS
T02989
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
cmy
Chelonia mydas (green sea turtle)
Pathway
cmy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102934100 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmy03041
]
102934100 (CDC40)
Spliceosome [BR:
cmy03041
]
Complex C
Other components
Step II factors
102934100 (CDC40)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
102934100
NCBI-ProteinID:
XP_007057473
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Position
3:81701623..81754117
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AA seq
580 aa
AA seq
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MSAAIAALASYGVSDSGSDSGSDTEGSSRRSAQVASRDSVLHLASPPPAPQALAVDSAPE
VAVKEDVETGVHLDPAIKEVQYNPTYDTMFAPEFGPENPFRTQQMAAPRNMLSGYAEPTH
INDFMFEQQRRTFATYGYALDPSLDTQDVATKYIGSVEEAEKNQGLTVFETGQKKIEKRK
KFKENDASNIDGFLGPWAKYVDEKEVAKPSEEEQKELDEITAKRQKKGKHEDDKPGEEKT
ILHVKEMYDYQGRSYLHVPQDVGVNLRSTVPPEKCYLPKKQLHVWSGHTKGVSAVRLFPL
SGHILLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNNAGTQFLSAAYDRYLKLW
DTETGQCVSRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDVRSGEIVQEYDRHLG
AVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQ
SMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDADGKLNIWDWKT
TKLYSRLKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgctatcgccgcgctcgcgtcctacggtgtctccgactcaggctccgactcg
ggctcggacactgagggaagctcccgccgctcggcgcaggtagccagccgggactcggtg
ctgcatctcgcttcaccgccccctgccccgcaggccttggcggtggactcggccccggag
gtggctgtgaaggaagatgtagagacgggagtccacctcgatcctgctatcaaggaagtt
cagtacaatcccacttatgacaccatgtttgcaccagagtttgggccagaaaacccgttt
aggactcagcagatggctgcacctaggaatatgctttctggatatgcagaaccaacacat
atcaatgatttcatgtttgaacaacagagaagaacatttgcaacttatggttatgcatta
gatccctctctagatactcaggatgttgctactaaatacattggttctgtagaagaagct
gaaaagaatcaaggtttaacagtatttgaaacaggacaaaagaaaatagaaaaaaggaag
aaatttaaagaaaatgatgcatctaatattgatggcttcctgggaccatgggcaaaatac
gtggatgagaaagaagtagccaaaccctcagaagaagagcagaaagaattggatgaaata
acagcaaagaggcagaagaaaggcaaacatgaagatgataaacctggagaggagaagact
atcctacatgtcaaagaaatgtatgactaccagggaagatcctatcttcatgttcctcaa
gatgttggcgttaatctccgttctacagtgccccctgagaaatgctatctcccaaagaaa
cagctccatgtatggtctggacatacaaagggtgtcagtgcagtcaggttgtttccactc
tctggccacatattgctatcttgctccatggactgtaaaattaaactatgggaggtatat
ggtgaacgaagatgcttacgaacatttattgggcacagtaaagcagttcgagacatctgc
tttaacaatgctggaactcaatttcttagtgcagcatatgaccggtatcttaaactctgg
gacactgaaacagggcaatgtgtttcaaggttcacaaacaggaaggttccatactgtgtc
aaattcaatcctgatgaagataaacaaaatctttttgtggcaggaatgtcagataaaaaa
attgtacagtgggatgttcgaagtggggaaattgtgcaggagtacgataggcatttggga
gctgtcaacaccattgtgtttgtggatgagaatagacggtttgtgagtacatctgatgac
aagagtttaagagtctgggaatgggatattcctgtcgatttcaagtacatcgcagagcca
agtatgcactcgatgcctgccgtcaccttgtctccaaatggaaaatggctggcttgtcaa
tcaatggataatcagattttgatttttggagctcagaacagattcagattaaacaaaaag
aaaatcttcaagggtcacatggtggcaggttatgcttgtcaagttgatttttcacctgac
atgagctatgtgatatcaggtgatgcagatggaaaacttaacatctgggactggaagacg
acaaaactctacagtaggttaaaagcacatgacaaagtttgtataggcgcagtctggcat
ccacatgaaacatccaaggtcatcacctgtggctgggatggtcttattaaattgtgggac
tga
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