Chelonia mydas (green sea turtle): 102940179
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Entry
102940179 CDS
T02989
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
KO
K12006
tripartite motif-containing protein 16
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmy04121
]
102940179
Ubiquitin system [BR:
cmy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102940179
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4
zf-B_box
zf-RING_2
zf-C3HC4_3
PRY
zf-RING_5
Abi_alpha
zf-ANAPC11
U-box
GHL6
zf-Nse
CENP-F_leu_zip
Motif
Other DBs
NCBI-GeneID:
102940179
NCBI-ProteinID:
XP_007065112
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Position
14:14527796..14544993
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AA seq
562 aa
AA seq
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MSNTNFFFLEDNIVCPICLEVFTDPVTTACGHNFCMDCLQDYWDHQAVIGECPYCPQCRE
PFSSRPRLRKNISLGEIAEKFTREEAQATAKLPIAGPNDVPCDLCSSRKVKSIKSCLQCM
ASLCENHTQLHYENKTFRNHQLLEPIGDLKARLCQKHHKLQELYCRTEGGLVCYTCIREE
HKNHDAIPLQEERARKVVEAKRVQANVENQILMMASDSHKHKGRVIYLTKVVKNSRDEVN
QSFAEIIKEIKRMQVKVLEFLDKEERAALIHLGNSIQQKQGKLADLNKQNLWLTDLLDNA
SDQQFLQEFPNLKKLGACTEPVVSLKCEESSSFVSLRQTLGDLKAQLAMVGLCFINKILM
KGITMQPYEVIPADMDRKSLLKYYCNLNFDPNTASEELLLFKETHSVLNMGILMESFFGS
CQGFNHWPQVLCTRSLCEGCHYWEVEVSDSWVCLGATYSYMHKTGKSCIFYLIGRNNTSW
CLEWDSLKFSVWHNNIQTVVKGSYYKIIGVFLDYAAGSLTFYGVTNTMNLIYRFLTTFTE
PLYPAVMVSSGGSITLKQHPLP
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacacaaatttttttttccttgaggacaacatcgtgtgcccgatctgcttggag
gtgttcacagacccagtcaccactgcctgtgggcacaacttctgcatggactgcttgcag
gattactgggaccaccaagctgtgattggagagtgtccctactgtccacagtgccgagaa
cccttcagctcacggcctcgactccgcaaaaatataagccttggagaaatagcagaaaag
ttcacccgggaggaggctcaggcgacagccaagcttcccatagcgggtccaaatgatgtc
ccttgtgatctctgctcctctaggaaagtgaagtccatcaagtcctgcctgcagtgcatg
gcttccttgtgtgaaaaccatacccagctgcactatgaaaacaaaacttttaggaaccac
cagctgctggaacccataggtgacctgaaagccagactatgccagaagcaccacaagctg
caggagctgtactgtaggacggagggtgggctagtttgctacacctgcatccgagaggaa
cacaagaaccatgatgcaatcccactacaagaggagagagccaggaaagtggtggaggcc
aagagagtacaagccaatgtggaaaaccagatcctgatgatggcatcagacagtcacaaa
cacaaagggagggtgatctatctcacgaaagtggtcaagaattcaagagacgaggtgaac
caaagctttgcagagattataaaggagatcaaacgaatgcaggtgaaggtgttggagttt
ttggacaaggaggagagagcagccctgatccatctggggaattccattcagcaaaagcaa
gggaagcttgctgacctcaacaagcagaacctctggctgacagacctccttgacaatgca
agtgaccaacagttcctgcaggaattcccaaacctcaagaagttgggagcctgcactgaa
cccgtcgtcagtctgaagtgcgaggagagctcgagctttgtcagccttagacagactctg
ggtgacctgaaggctcagctagcgatggttggcctctgcttcatcaataaaatcctcatg
aaaggaataacaatgcaaccctatgaggtgataccagcagatatggacaggaagagcctc
ctgaaatactactgcaatctgaacttcgatcccaacaccgccagcgaggagctcttgctg
ttcaaggagacccactccgtgctgaacatgggcatcctgatggagtctttcttcgggtcc
tgccagggattcaaccactggccacaggtcttgtgtacccgcagcttgtgtgagggctgc
cattactgggaagtcgaggtctcagactcatgggtctgcttgggagcaacctacagttat
atgcacaagactgggaagagctgtatcttttacctgattggccggaacaatacctcctgg
tgcttggagtgggactccttgaagttctccgtctggcacaacaacatccaaaccgtggtg
aagggcagctattacaagatcatcggcgtcttcctggactatgctgctggctccctgact
ttctatggtgtcaccaacaccatgaacctcatctaccgcttcctgaccacattcacagag
ccactgtatcctgcagtcatggtgagcagcggcggctccattaccttgaagcagcatcca
ttaccttga
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