Chelonia mydas (green sea turtle): 102944488
Help
Entry
102944488 CDS
T02989
Symbol
CHD6
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 6 isoform X1
KO
K14436
chromodomain-helicase-DNA-binding protein 6 [EC:5.6.2.-]
Organism
cmy
Chelonia mydas (green sea turtle)
Brite
KEGG Orthology (KO) [BR:
cmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmy03036
]
102944488 (CHD6)
Chromosome and associated proteins [BR:
cmy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
102944488 (CHD6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Chromo
BRK
ResIII
DEAD
CHDCT2
HDA2-3
MUN
Motif
Other DBs
NCBI-GeneID:
102944488
NCBI-ProteinID:
XP_037771397
LinkDB
All DBs
Position
13:complement(29850514..30028973)
Genome browser
AA seq
2752 aa
AA seq
DB search
MHVPLELQVQMAVLNGYLPEVTFILKLMIMKIQKKEKQLSHSLMSGASLPCEYKPQAPFA
SSADREDLCPHVNIADLASHYQCPEEEPGEAVQKRTPSQNGMQDSGGGGTGVKKKRKKKA
PGELDVGEKGALEREMKPKRKREPKEPKEPKKPREPKKPREPKQKEAAKKPRKPREAKAP
KEPKEKKSSTEPAPKTKPKKASKEQGPTPVEKKKKGKRKNEIPVESLELDQGLLSPSLQS
PEESAESADSQKRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGAGRASALSASTLAWQA
EEPPEDDANIIEKILASRLVQKEVHPGGLAYEMEEFYVKYRNFSYLHCKWATLEELEKDP
RISQKIKRFRNKQAQMKHIFTEPDEDLFNPDYVEVDRILEVAHTKDSDTGEEVTHYLVKW
CSLPYEESTWELEEDVDPGKIKEFETLQIPPEIKHVERPASEFWQKLEKSRDYKNSNQLR
EYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLMDIHGPFLIIAPLSTIT
NWEREFRTWTEMNAIVYHGSQISRQMIQQYEMVYRDMQGNPLPGIFKFHVVITTFEMILA
DCPELKKIQWRCVVIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNSVEELFSLLN
FLEPQQFPSETAFLEEFGDLKTEEQVKKLQSILKPMMLRRLKDDVEKNLAPKQETIIEVE
LTNIQKKYYRAILEKNFSFLSKGANQHNMPNLINTMMELRKCCNHPYLINGAEEKILEDF
RKSHSPEALDFQLQAMIQAAGKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQR
RYTYERIDGRVRGNLRQAAIDRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWN
PQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQDINRKGSTN
GVQQLSKMEVEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTQTITIQSEGKGSTFA
KASFVASGNRTDISLDDPNFWQKWAKIAELDTDAKNEKESLVIDRPRVRKQTKHYNSFEE
DELMEFSELDSDSDERPTRSRRLNEKTRRYLRAECFRVEKNLLIFGWGRWKDILTHGRFK
WHLNEKDMEMICRALLVYCVKHYKGDEKIKSFIWDLITPTKDGQNQALQNHSGLSAPVPR
GRKGKKTKNQMLLPEIKNADWLASCNPDIVLHDDSYKKHLKQHCNKVLLRVRMLYYLKAE
VLGEVADKAFEGTPARELDVLLPDIDYVEIPVDWWNAEADKSLLIGVFKHGYERYNAMRA
DPALCFLEKVGMPDEKLLSAEQGVNDGAQDAAERGNVEKEENSGDRVEGLPQQEDSGNLC
GEAAEKQDDNVAAQDGSDSERSCWPVSSALTARLRRLVTVYQRCNRKELPPRAEMLVPSN
HGYWLQEEMFRRAAELDPVNKEMQKRWTRREQADFYRTVSSFGVIYDQEKKAFDWTQFRA
ISRLEKKTDESLEKYFYSFVAMCRNVCRLPLWKEDGPPDPSIYVEPITEERAARTLYRIE
LLRKVREQVLKYPQLHERLTLCRPSLYLPVWWECGKHDRDLLLGTAKHGLNRTDYYIMND
PELSFLDAYRNYAQHKRAGAQGPENLCCLHQMNSKLYGSPSYCQMERTCESLENEAESQI
KLENLEDALSRAEGSPQDMSCDTFLSTVRDIISMNCDESSLPDSLMCMMYEEKACPSEHS
SLAHDSPRCTHVSNSAAKFAEGKLDGDEDPSSCEAEAIRETSFLESLQMGCDQMDSPNEG
GEPWPSAPASQPSRSVSMEISDALQRASPGPGSPELASTEGVISLGLYGPSLHNLEIKIP
PEQRFMGLLHKKGLEDKSVPSQSHSEEEEEENSEMAADVVEGLRGTPEARTEGNPKANTL
AGEESGSSLPAPKNTCPGVNGEAELSGQVALQCNSGAGDGEADHKSAAEHLPDWPNSLPP
APSPAAAAQSELPKAGPVSMEGEHWEAGSAAQMGSSAAWHLEEHKPKQEDDECENKDEEE
KEGTGQSQDCPEKYLEEESKSSPCTQPGEMDELQDSRAPTIAQLLQEKTLYSFSEWPKDR
VIINRIDNICHAILKGKWPSSSQQFETQTLMPTSGLASNAGTRNSFAEPEAPDPSFNNGV
LVAQVQKESFLAPAFTKDERKHRQPYEFELERDAKPRSLEQLAASHSRPPVVLNGWRDSA
GNLARASDGSPGNPTPFPLNSNLPKLGTVHSLQGSLGMDLSGILQAGLIHPVTGQIVNGS
LRRDDAAMRRRRGRRKNVEGMDLIFLKERSLQTGLQDVQEDQTQPAQSSPHPDGLVTATS
TPNTVTATSIRTEKAVPNKSLLDWLRQQSDYTLDVPGFSTSFSDKPKQRRQRCKDPSKLD
INSLTGEERVPVVHKGTGRRLGGAMAPALKELPRWLDANLEYAVAADWADIVKLSGFLPE
SKFNRILTEPVLRDTGPRRRGRRPRSELIKAPGVVSDSSSGMGPLFMNGLIAGMDLVGLQ
NMRNMQGIPLTGLVGFPAGFAAVPAGEDVKSTLSMLPMMLPGMATVPQMFGVGGLLNPPM
TTTCTSTAPASLTSTTKSGTSNTEKATEDKQSSQDVKNEPLSEDKPGPSSFSDQTESAIT
TSSPVAFNPFLIPGMSPGLLYPSMFLSPGIGMTLPGIQQTRHSEATNLESQKRKRKKAKG
EPTNPEPETVSLSEKEAANSQNCTEQTQSLSSEKEHDIQAEEKELKEINNTN
NT seq
8259 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgcctctggagttgcaggtgcagatggctgtgcttaatggttatttaccagaa
gtaacattcatcctcaagttgatgataatgaaaatacagaagaaagaaaagcagctgtct
cattccctgatgtctggcgcctcactcccttgcgagtacaagcctcaggccccctttgcc
agcagcgccgatcgggaggacctgtgtccccacgtgaacattgcagacttggccagtcac
taccagtgcccagaggaggagcctggcgaggctgtacagaagaggacaccatcccagaat
ggcatgcaggacagcgggggtgggggcaccggggtgaagaagaaacggaagaaaaaggcc
ccgggggagttggatgtgggggagaaaggagctttggagagagagatgaaaccaaagagg
aagagagagcccaaagagccaaaggagcccaagaaacccagggagcccaagaaacccagg
gagcccaagcagaaggaggcagccaagaaacccaggaaaccccgggaggccaaagccccc
aaggagcctaaagaaaaaaagagcagcactgagccggcccccaagacaaagcccaagaag
gccagcaaggagcaaggaccaacccccgtggagaagaagaagaaagggaaaaggaaaaac
gagatcccagtggagagtttggaattggatcaaggcctccttagcccgtctctgcagagc
cctgaggagtctgctgagtcggccgacagccagaagcgccgctcgggtcgccaggtgaag
cggaggaagtacaatgaggacctggatttcaaagtggtggatgacgatggcgagacgata
gcagtgctgggagctgggcgagcctctgcgctctccgcgtccacgctggcatggcaggca
gaggagccccctgaggatgatgccaacatcattgagaagatccttgcctccagactggtg
cagaaggaggttcacccgggcggcctggcctatgagatggaggaattctacgtcaagtac
agaaacttctcctacctgcactgcaagtgggcgacgctggaagagctggagaaggacccc
aggatctctcagaagataaagcgctttcggaacaagcaggcccagatgaagcatatcttc
acagagcctgacgaggatttgttcaacccagactacgtggaggtggatcggatcctggag
gtggctcacacgaaggactctgacaccggggaggaggtgacccactacctggtcaagtgg
tgctcgctgccgtatgaggagagcacctgggagctggaggaagacgttgaccctggaaaa
atcaaagagttcgagaccttgcagatcccaccagagatcaaacatgtggagcgccccgct
tctgagttctggcagaaactggagaagtcacgggactataagaatagcaaccagctacgg
gagtaccagctggaggggatgaactggctgctcttcaactggtacaacaggaagaattgc
atcctggcggatgagatgggcctggggaagacgatccagtcaatcaccttcctttctgag
atcttcctgatggacattcatggtcccttcctcatcattgcgccgctctccaccatcacc
aactgggagcgggagttccgcacctggacggagatgaatgccatcgtgtaccatggcagc
caaatcagcaggcagatgatccagcagtacgagatggtgtacagggacatgcagggtaac
cctcttccagggatcttcaaattccatgtggtgatcaccaccttcgagatgatcctcgcc
gactgccccgagctgaagaagatacagtggcgctgcgtggtcatcgacgaggcccatcgg
ctgaagaacaggaactgcaagctgctggaggggctgaagcttatggctctggaacacaag
gtgctgctgactgggacacccctgcagaactcagtggaggagctcttcagcctgctgaac
ttcctggagccccagcagttcccctcagagacggcgttcctcgaggagtttggggacctg
aagacagaggagcaggtgaagaagttacagtcaatcctgaagcccatgatgctgcggcgg
ctgaaggatgatgtggagaagaacctggcgcccaagcaggagaccatcatcgaggtggag
ctgaccaacatccagaagaaatactaccgggccatcctagagaagaacttctccttcctg
tccaagggcgccaaccagcacaacatgcccaacctcatcaacaccatgatggagctgcgc
aagtgctgcaaccacccctatctcatcaacggggcggaggagaaaatcctggaagacttc
cgtaagtcgcacagcccagaggcgctggactttcagctgcaggccatgatccaggcggct
ggcaagctggtgctgattgacaagctgctgcccaagctgatcgccggtgggcacaaggtg
ctgatcttctcccagatggtgcgctgcctggacattctggaggactatctcatccagagg
cgatacacctatgagcgcatcgatgggcgggtgcgcgggaaccttcgccaggctgccatc
gatcgcttctgcaaaccggactcagaccgcttcgtcttcctcttgtgcaccagggcggga
ggcctgggcattaacctcacagctgccgacacctgcatcatcttcgattcagactggaac
ccacagaacgacctccaggcgcaggcgcgctgccaccggatcgggcagagcaaggccgtg
aaggtctatcgcctcatcaccaggaactcctacgagcgcgagatgttcgacaaggccagc
ctcaagctgggcctggacaaggccgtgctgcaggacatcaaccgcaagggcagcaccaac
ggggtgcagcagctctcaaagatggaggtcgaagacttgctacggaaaggagcatacggg
gctttaatggacgaggaagatgaaggctccaagttctgcgaggaagatattgatcagatc
ctgcagcgcagaacccaaacgatcactatccagtcggaagggaagggttccacctttgcc
aaggccagctttgtcgcttcagggaacagaaccgacatttccttggatgaccccaacttc
tggcagaagtgggctaagatagcagagctggacacggatgcaaagaacgaaaaggagagc
ttagtgatcgacaggccccgtgtccgcaagcagaccaagcactacaactccttcgaggag
gatgagctgatggagttctcggagctggacagtgactccgacgagcggcccacgcgctcg
cggcgcctcaatgagaagacgcggcgctacctgcgggctgagtgcttccgcgtggagaag
aacttgctcatattcggctgggggcgctggaaggatatcctgacccatggacggttcaag
tggcacctgaacgagaaggacatggagatgatttgccgggccctcctggtctattgcgtc
aaacactacaagggagatgagaagattaagagttttatctgggatctgatcactccgacg
aaggacggccagaaccaggccctgcaaaatcactcagggctgtcggccccagtgcccagg
ggcaggaaggggaagaagacgaagaaccagatgctgctgcctgagataaagaacgcggac
tggctggccagctgcaaccccgatatagtcctgcatgatgacagctacaagaagcacctg
aaacagcactgcaacaaggtgctgctgcgggtgcgaatgctctactacctgaaagctgaa
gtgctgggagaggtggctgacaaagccttcgaagggaccccagccagggagctggacgtg
ctgctgccggacatcgactatgtggagatcccagtggactggtggaatgcagaggccgat
aaatcgctgcttattggagttttcaaacacggttatgagaggtacaacgccatgcgagca
gacccggcactatgcttcctggagaaggtgggcatgccagacgagaagctgctgtctgcg
gagcagggcgtcaatgatggggcacaggatgctgcagaaagaggaaacgttgagaaagaa
gagaacagtggagacagagtcgaggggctgccacagcaggaggactctgggaatttgtgt
ggagaagctgctgagaagcaggatgacaatgtggcagcccaggatggctccgactcagaa
agatcctgctggcctgtctcgtccgccctcacagccagactgcggcggctcgtcaccgtt
taccagcgttgcaaccgcaaggagctgcccccccgagccgagatgcttgtgccaagtaac
catggctactggctgcaagaggagatgttcaggagagctgctgagttggacccggtgaac
aaggaaatgcagaaaagatggacgagaagggagcaggcagatttctaccgcactgtctcc
tcctttggggtcatctatgaccaggagaagaaggcctttgactggacccagttccgagcc
atttcccgcttggagaagaagacagacgagagcctggagaaatacttctacagctttgtg
gccatgtgcaggaatgtctgccgtctccccctctggaaagaggacggtccacctgatccc
agcatctacgttgagccaatcacagaggaacgtgctgcaagaacgctgtaccggattgaa
cttctaaggaaggtccgggagcaagtgctcaagtacccgcagctccatgagcggctcacg
ctgtgcaggcccagcctgtaccttcctgtctggtgggagtgtggcaagcatgaccgggac
ctgctgcttggaacagccaagcatggactgaaccgcactgactactacatcatgaacgat
cctgagctgtcatttttggacgcatatagaaactatgctcagcacaaaagagcaggtgcc
caaggcccagagaacctgtgctgcctccatcagatgaactccaaactctatggctcccct
tcgtactgccagatggaaaggacctgtgagtccctggagaacgaagctgagagccagatc
aagctcgaaaacctggaggatgcgctctcccgggcggagggcagccctcaggacatgagc
tgcgacacgttcctgtcgacagtgcgggacatcatttccatgaactgtgatgagagctcc
ttgccggactctctgatgtgcatgatgtatgaggagaaggcgtgccccagtgagcacagc
tctctcgcccatgacagccccaggtgcacacatgtcagcaacagtgctgccaaatttgct
gagggcaaactagatggggatgaggacccatccagctgtgaggctgaggccatcagagag
acctccttcctggagagcttgcagatgggctgtgaccaaatggatagtcccaatgaaggt
ggggagccttggccctcagccccagccagccaaccctccaggagtgtctccatggagatc
agtgatgctttgcagcgggccagtccagggcctgggtcacctgagctcgccagtacggag
ggggtgatcagcctaggcctatatgggcccagtctccataacttggagataaagatccca
ccggagcagaggttcatgggcctgttacacaagaaaggcttggaggataaatcggtgcca
agtcagagccacagcgaggaggaggaggaggagaattctgagatggcagcagatgttgta
gaaggattgaggggcaccccagaggccaggactgaagggaaccccaaagctaacacacta
gctggggaggaatctggttccagccttcctgctcccaagaacacttgcccaggagtgaat
ggtgaggcagagctttcaggacaggtggcattgcagtgtaacagcggggcaggggatggg
gaggccgaccacaagagcgctgcagagcatttgccagactggccgaacagcctcccccca
gcacccagcccagctgcagctgctcagtcggagctcccaaaggctgggcccgtcagcatg
gaaggggagcactgggaagctggctctgctgcgcagatggggagcagcgcggcctggcac
ctggaagagcacaagccaaagcaggaagacgatgaatgtgagaacaaagacgaggaagag
aaagagggcactggccagagccaagattgtccagagaagtatttggaagaggagagcaag
agctctccctgtacccagcctggagagatggacgagctgcaggattcccgtgcacccacc
attgcccagctgctgcaggagaagacgctctactccttctcggagtggcctaaggaccga
gtgatcattaaccgcatagataatatctgtcacgccatcttaaagggcaagtggccctct
tctagccagcagtttgaaacacaaaccctgatgcccacatcagggttagccagcaacgca
ggcactaggaacagctttgccgagccagaagccccggaccccagcttcaacaacggagtg
ttagttgcacaagtacaaaaggaaagcttcctggctcctgcctttacgaaggatgaacga
aagcacaggcagccctatgagtttgagctggagagagacgccaaacctagaagcctcgaa
cagttagctgcatcacactcccgtccacctgtagtgctgaatggctggcgggactcggca
gggaacctggccagagcatctgatggatccccaggaaaccccactcctttccccctgaac
agcaacctgcccaagttagggacagtgcactccctgcaggggtccctgggcatggacttg
tccggcatcctccaggcagggctaatccatcctgtcacagggcagattgtcaatggaagc
ctccggagagatgatgctgccatgaggagacgacggggcaggagaaaaaatgtggaaggg
atggaccttatcttcttgaaggagaggagccttcaaaccgggctgcaggatgttcaggaa
gatcagacccagcctgcacagagcagcccgcacccggacgggctggtcaccgctacctca
actccgaatactgtcacagccacaagcatccggacagagaaggctgttccaaacaagagt
ctcctggactggctaagacagcagtcggactacacactcgatgtccctggcttcagcaca
agtttttcagacaagcccaagcagaggaggcagcgctgcaaggaccccagcaaactggac
ataaactcactcacaggagaggagcgggtgcctgtggtccataagggtacaggacggagg
ttagggggagccatggcaccagcattgaaggaattgccaaggtggcttgatgcaaacttg
gagtatgctgttgcagcagactgggctgacattgttaagctttcaggattcctgccagaa
agcaagttcaatcgtatcctaactgagcctgtgctccgggacaccgggccccgtcgaaga
gggaggaggccaagaagtgaacttattaaagcccctggcgtcgtatcggattcttcttct
ggaatgggaccgttattcatgaatggacttattgctggaatggatctagtgggacttcag
aacatgagaaacatgcaaggcatccctttaactgggctggttgggtttcctgctggattt
gcagcagtgcctgctggtgaggatgtcaaaagcaccctaagtatgttgcctatgatgctg
ccaggcatggctactgtaccacagatgtttggtgttggaggacttctaaacccaccaatg
acaactacttgtacttcaactgctccagcttcattaacaagcacaactaaaagtggtaca
tcaaatacggaaaaagctactgaggacaaacaaagtagccaggatgtgaaaaatgaacct
ctgtctgaagacaaacctggtcctagttcattttctgatcagacagaatctgcaataact
accagtagtcctgttgcttttaatccatttcttatcccaggaatgtcccctggactgctc
tatccatctatgtttctttcccctggtattggcatgacattgccaggcatacaacaaacc
agacactctgaggcaacaaatctagaaagccagaagcggaagagaaagaaagctaaaggg
gaaccaacaaatccagaaccagaaactgtctcgctgtctgaaaaagaagctgcaaacagt
caaaactgtacagagcaaacccagtctctgtcatcagagaaagaacatgacatacaagcg
gaagagaaggagttaaaagaaattaacaataccaattag
DBGET
integrated database retrieval system
