Caldicellulosiruptor naganoensis: OTJ99_000904 Help Entry OTJ99_000904      CDS       T08720                                  Name (GenBank) PolC-type DNA polymerase III   KO K03763   DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] Organism cnag  Caldicellulosiruptor naganoensis Pathway cnag03030   DNA replication cnag03430   Mismatch repair cnag03440   Homologous recombination Brite KEGG Orthology (KO) [BR:cnag00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     OTJ99_000904    03430 Mismatch repair     OTJ99_000904    03440 Homologous recombination     OTJ99_000904  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:cnag03032]     OTJ99_000904    03400 DNA repair and recombination proteins [BR:cnag03400]     OTJ99_000904 Enzymes [BR:cnag01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.7  DNA-directed DNA polymerase      OTJ99_000904 DNA replication proteins [BR:cnag03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     DNA polymerase III holoenzyme      OTJ99_000904 DNA repair and recombination proteins [BR:cnag03400]  Prokaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     DNA polymerase III holoenzyme      OTJ99_000904 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_pol3_alpha RNase_T PHP DNA_pol3_finger HHH_6 Rv2179c-like DNA_pol3_a_NII RNase_H_2 HHH_3 DEDDh_C DUF655 T2SSK DNA_pol_A_exo1 tRNA_anti-codon GPI RecG_wedge DUF6282 Motif Other DBs NCBI-ProteinID:  WAM32368 LinkDB All DBs Position 980268..984476 Genome browser AA seq 1402 aa AA seqDB search MSEVAFLPLKPVKVEFDKASKLLKIYMDSLEGLNEINLIELENRFKNSMDICLDVEVKLL NGKVVNIQEFLQNYRWFLMYKISKKCNGLKAFLRECEICFEGEKLVFLVPNGIRDIMLER KLDVLIEDILNEEFGIKCDVEFKIKDFHIHFELDNEIENYLKESEEKKKEKEAKDTEKKD SVQDPDVIFGKKINEKEEITPISLIKVGTKCIIEGEVFNIEIKETKNQNVLIYKLYVTDY TTSTYVKIVAKKDNIPNSISVGDYIKVEGNVEFDEFEKATVVNAKNINRAVKPERLDTAE KKRVELHAHTKMSTMDAVCSAEELIKTAAKWGHRAIAITDHGVVQAFPEAQEVSKSEGVK IIYGMECYLIDDGVPVVYNPKEDQDLDATYVVVDIETTGFDNQRDRIIEIGAVKIENGEI VDKFSTFVDPQGKIPVRISELTGIHQDMVDSAPKLADAILEFEKFCSGSILVAHNAQFDI GFLKRAYQECGLIFDYTYVDTLELSRRVLTELSSHKLSKVADFLNIQLKSHHRADSDAET TAKIFISLIEKLKSRGYKYLKELNTIETNAKADLKSHSYHATILVKNQQGLKNLYKLVSY SHLEYFYKRPRIPKSLLIQLKDGLILGSACESGEVFRAIVEGKSDEDIEKIASLYDFLEI MPVENNSFLIREGYLKDEDQIREINKKIYQLGKKLNKLVVATSDAHYCHPHQRILRQILK HNQGYNDVENDPYLYFRTTDEMLKEFEYLGKEAAYEVVVENTNKIADMIEDVKPIPDETF PPKIEGAEEEIYNMTMKKAHEIYGDPLPDIVRQRLEKELNSIIKNGFAVMYLIAQKLVTK SLSDGYLVGSRGSVGSSLVATMCGITEVNPLPPHYVCPNCKYSEFVTDGTVGCGYDLEDK DCPRCGTKLRKDGHDIPFETFLGFDGDKEPDIDLNFSGEYQPIAHRYTEELFGQGYVFRA GTISTVAEKTAHGFVTKYAEEKGLNLHPAEILRLSQGCTGVKRTTGQHPGGLMIVPKDKE IFDFTPIQHPADSEDKNVITTHFDYHAISGRLLKLDILGHDDPTVLRMLQDLTGVDPRSI PLDDKETLSIFTSTEALGISPEDIDCEVGTFGIPEFGTRFVRQMLIETKPKSFAELVRIS GLSHGTNVWTNNAQDLVRNGIATLKEVISTRDDIMLYLIQKGVPPKDSFRIMEDVRKGKG LKPEDEELLRSYGVPEWYIESCKKITYMFPKAHAAAYVMMAFRIAYFKVHYKEAFYATYF TVRADDFDYATIMKGREFIRQKIRDMENRINTLSPKDKNLLTVLEIANEMLARGLKFYPV DLNESDAEKFIIKDGGLLIPFNALPNIGVAAARNIVEARKEGRFLSVDDLQRRAKLNKQV IEILTQYKVLKDLPQTSQLSFF NT seq 4209 nt NT seq  +upstreamnt  +downstreamnt atgagtgaggttgcttttttgccactaaaacctgtcaaggttgaatttgacaaggcaagc aagcttcttaagatatatatggacagtcttgaagggctgaacgagataaatctcattgag cttgaaaataggttcaaaaattccatggatatttgtttagatgtggaagttaaactttta aatggaaaagttgtgaatatacaggagtttttgcaaaactacagatggtttttgatgtat aaaatttcaaaaaaatgtaatggtcttaaagcattcttgagagagtgtgagatttgtttt gaaggggaaaaacttgtgtttttggtccctaatggaattagagacataatgcttgaaaga aagttagatgtgctgattgaggatattttaaatgaagaatttggcataaagtgcgatgtt gagtttaaaatcaaagactttcatattcactttgagcttgataatgaaattgaaaactat ttgaaagagtccgaagagaagaaaaaggaaaaggaagcgaaagacacagagaaaaaggat tctgtacaagatccagatgtaatatttggtaagaaaataaatgaaaaagaagaaattaca ccaatttctttaataaaagtaggtaccaagtgcataattgaaggcgaagtgtttaatatt gaaataaaggagacaaaaaatcaaaatgtactcatctataaactgtatgttacggactac actacatctacctatgttaaaattgttgccaagaaagacaacattcctaattctatttca gtaggagactatattaaagttgaaggaaacgttgagtttgatgagtttgaaaaagcaaca gttgtgaatgcaaaaaatataaacagagctgttaagcctgaaaggcttgatacagcagag aaaaaaagagtagaacttcacgctcacacaaagatgtctacaatggatgctgtgtgttca gcagaagagcttataaaaactgctgcaaagtggggacatagagcaattgcaattactgac cacggcgttgtacaagcatttccagaggcacaagaagttagcaaaagtgaaggtgttaaa atcatctatggaatggaatgctatttgattgacgatggtgtaccagttgtttacaatcca aaagaagaccaggacttagatgctacatatgtagttgttgatattgagacaacaggtttt gacaaccaaagagatagaataattgagattggagccgtcaaaatagaaaatggtgagatt gttgataaattttcaacatttgtagacccacaaggaaagattcctgtcagaatctctgag ctgacaggtattcaccaagatatggtagatagtgcaccaaagcttgcagatgctatatta gaatttgaaaagttctgcagtggcagtattttagttgcacacaatgctcagtttgacatt ggatttttgaaaagagcttatcaggaatgtggtcttatctttgactatacatacgttgat acattagagctttcaagaagagtacttaccgagttgtcttcccataagttaagcaaagta gcagattttttgaatatccagctcaaatctcatcatagggcagattctgatgcagaaacc actgcgaaaatctttataagtcttattgaaaagttaaaaagcagaggatacaaatatttg aaagaactcaatactattgagacaaatgcaaaggcagatttaaaatcacatagttaccat gctacaatacttgttaaaaatcagcaggggctcaagaacctctataaacttgtttcatat tctcaccttgaatatttctataaacgaccaagaataccaaaaagcttgcttattcaatta aaagatggtcttattttaggaagtgcctgtgaatcaggagaggttttcagggctattgtg gaaggaaaaagtgatgaggatattgaaaagatagcttcactttacgattttcttgaaatt atgccagttgagaataactcttttctaattagagaagggtatttaaaagatgaagatcaa ataagagaaatcaacaaaaagatatatcagcttgggaagaagttgaacaaattggttgtt gcaacatctgatgcacattattgccatcctcatcagagaatcttgaggcagattctaaag cacaaccagggatataatgatgtagaaaatgatccttacttgtactttagaacaaccgat gagatgctaaaagagtttgaatatcttggtaaagaagctgcatatgaggttgttgttgag aacaccaacaaaattgctgatatgatagaagatgtaaaaccgatacctgatgagaccttt ccaccaaagattgaaggcgccgaggaagagatttataacatgacaatgaaaaaggcacat gaaatttatggagatccacttcctgatattgtaaggcaaaggcttgaaaaagagctaaat tctatcataaaaaatggatttgctgtaatgtatttaattgcacaaaagcttgtgacaaag tcactttcagatggttatttagttggctctcgtggttctgttggttcatcgcttgttgct acaatgtgtggaattacagaggtaaatccactgccaccgcactatgtctgtccaaactgt aagtattctgagtttgtgacagatggaacagttggctgtggttatgaccttgaggacaaa gactgcccaagatgtggtacaaaacttagaaaagacgggcatgatataccatttgagact tttttaggttttgatggtgacaaagaacctgatatagatttgaacttctccggagagtac cagccaattgcgcacagatatacagaagagctttttggtcaaggatatgttttccgagca gggacaatttcaacggttgctgaaaagactgcacacgggtttgttacaaagtatgcagag gaaaaaggtttgaacttgcaccctgcagagattttaagactttcacagggatgcacaggt gttaaacgtacaacaggtcaacacccgggtggacttatgattgttccaaaagacaaagag atttttgattttacaccaatccagcatcctgcagatagcgaagacaagaatgtgattaca acccactttgactatcatgcaatctcgggaaggttattgaaacttgacatacttggccat gacgatccaacagttttaagaatgcttcaggacctaaccggagttgacccgcgatcaatc ccacttgatgataaagagacattatcaatttttacaagcacagaagcactgggaatttca ccagaggatatcgactgtgaggttggaacttttggcataccagaatttggcacaagattt gtaaggcagatgctaatagagacaaagccaaagtcgtttgcagagcttgtcagaatatca gggctttctcacggaacaaatgtgtggacaaacaacgcacaggaccttgttagaaatggc attgcaacgttaaaagaggtaatctcgactcgtgatgacataatgctataccttattcaa aaaggtgttccaccgaaagacagttttagaataatggaggatgttcgaaaaggtaaggga ttaaagccagaagacgaagagcttttgagaagctacggtgtgccagagtggtatatagaa agctgtaagaagattacgtacatgttcccaaaagctcacgcagcagcatatgttatgatg gcgtttaggattgcctactttaaagttcattataaagaagccttttatgccacctatttt acagtcagggcagatgactttgactatgcaaccataatgaagggaagagaatttataaga caaaagattagagatatggaaaatagaataaatactttatctccaaaggacaaaaacctt ctgacagtgcttgagatagcaaatgagatgttagcaagaggtcttaagttttatccggtt gatttaaacgagtcagatgcagagaagtttataataaaagatggtggacttttgattcca tttaatgctttgccaaacattggagttgctgctgcacgcaatattgttgaggcgagaaaa gaaggaagatttttgtcggttgatgaccttcaaagaagggcaaaactaaacaaacaggta attgagatacttacacagtataaggttttgaaagaccttcctcaaacaagccagctgagt ttcttttaa

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