Caldicellulosiruptor naganoensis: OTJ99_002080
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Entry
OTJ99_002080 CDS
T08720
Name
(GenBank) endo-1,4-beta-xylanase
Organism
cnag
Caldicellulosiruptor naganoensis
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_10
CBM_4_9
CBM9_1
SLH
TFIIA
Mann_GBD_bact
Med13_C
DDHD
Motif
Other DBs
NCBI-ProteinID:
WAM31244
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Position
complement(2077968..2082290)
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AA seq
1440 aa
AA seq
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MRRKTLALLVLLVFLVSIIAPALSPSFGQKVSAQTQNPLDYYAKYDFENGTQGWMARGAS
TTVETVYKVVYEGDYSLKVSGRTSAWDGAIVDLTSELAPSVTYTVSMYVYHNDAKPQRFS
VYAYLKDSAGEKYIQVIDKVAVPNFWKKINGKFTITTSNQIEKIQLLVCVPTSKTVEFYV
DNIEIAGPNRAGINPVVKSTTFESGIFEGWQPRGSSVSISVVDTVTHTGSKSLYVTGRTQ
NWNGAQIDVTSLLEKGKSYEISVWVYQDTGSTQKLTLTMERKNADGSTDYDSIVHQKDVG
TNTWVELKGTYSVPTTAIQLLLYVESPNATLSFYIDDLKIVDPNPGTAGVRQPEWEIPSL
FEQYKNYFSIGVAIPYRVLTNPVEVQMVLKHFNSITAENEMKPDAIQKTEGNFTFNVADE
YVNFAQQNGIGIRGHTLVWHQQTPDWFFKRSDGTALDPNKPEDKQLLRDRLKTHIQTLVG
RYAGKIYAWDVVNEAIDENQPDGYRRSEWYRILGPTPETGGIPEYIILAFQYARQADPNA
KLFYNDYNTENPKKRQFIYNLVKALHERGLIDGVGLQGHINVESPTVKEIEDTIKLFSTI
PGLEVQITELDISVYTSSSQSYNSLPQDIAIKQAQKFRDIFEMLKKYKGIVTNVTFWGLK
DDYSWLSKNGPNWPLLFDSNYQAKYAYWAIVEPSVLPLAINKAYANNAQPRIDGLMDKEY
KGTIPVTIQNDAGQDIAQVRSLWNGNELSLYITVNDTSVDVNNDKVMIFVDRDNGKLPEL
KDDDHWVSISRTGAKTESKIGYVKDYVVLQQLSGYVVEVKLLLNNSLAVNSSIGFDIAVV
DNGVQYSWNDKTNSQLIGTDTYGILTMADSVKFASAPKGTPKIDAELDDAWQNAQEITTD
TKVTVTGTVYDSAYAKARMMWDENCIYVYAVVYDPLLNKANTNPWEQDSIEIFIDENNHK
TPYYENDDVQYRVNYENTQTFGTNGEAKNFITATKIIPNGYIVEAQVYMRTTKLSEGMVI
GFDIQVNDADNTGKRVGVLTWNDKIGNNWRDTTKFGCLELIAAPVQQPTVQQPSTSPSTS
TTITYIITSTTPSQQTQTQQQTQQTQQQTQQQQTTQQPAQQQQQQQTTQQTQQQEGVVTT
KINPTSATTVNVGNDIKVVVPQGAVLGANATIKVEKIEKLDKEIGLGTLVEKPIKVTIEN
GNVVKPVKLEVKVEPQVFKDDNIPVAFAYDEQKGKWLPVATKKDVSSVTITTNKVGTVAV
VVARLDEIYKDISKDNWAYDTFKKAVTSGLIVGYEDMTLKPTKQVSFAEAAVVAQRAFEI
APKQEGTVKNTPQWAAQAIKALLDNEVITEVDDANRPLTRIEAVAIIMKLLEQSGVDIEP
KELEFTDLLEQSSIDVEYLAKAYSLGIVKGYPDKTFRPQNTITRAEFIALIMRALDVLRK
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagaaaaactctcgcattacttgtgcttttggtatttttggtaagcatcatagca
cctgctttgagcccatcttttggtcaaaaggtttctgcccagacacagaatcctttagat
tactacgctaaatacgattttgaaaatggaactcaaggctggatggcaagaggggcttca
actactgttgagaccgtatacaaagttgtttatgagggggattattcactaaaagtctct
ggtagaacttctgcatgggatggtgcaattgttgacctgaccagtgagcttgctccatct
gttacttacacagtttccatgtatgtatatcacaatgatgcaaaacctcaaagattttca
gtttacgcatatctcaaagactctgctggagaaaagtacattcaggtcattgacaaggta
gcagttccaaacttctggaagaaaatcaatggtaaattcacaataaccacatcaaatcaa
attgaaaagattcagctcctggtatgtgttccaacaagcaagacagtcgagttttacgtt
gacaatattgagatagcaggtccaaacagagcaggtataaaccctgttgtcaagagcaca
acatttgagtcaggtatatttgaaggatggcagccaagaggaagcagtgtatcgatttct
gtagtggacacagtaacgcatacaggttcgaaaagcttgtatgtaacaggaagaactcaa
aattggaatggtgcgcagattgatgtgacatcacttttagagaaaggaaagagttatgag
atatctgtatgggtatatcaggacacgggaagtacccagaaattgactttgacgatggag
agaaaaaatgcggatggtagcaccgactatgattcgattgtacaccagaaggatgtaggg
acaaatacatgggtagagctcaaaggcacgtattcagtaccaacaacagcaattcagctg
cttttgtatgtagaatctccgaatgcaactctcagcttctatattgatgacctgaaaata
gttgatccaaatcctggaacagctggagtgagacagcctgaatgggagataccatctttg
tttgaacagtacaaaaactactttagcattggtgttgcgattccttatagggttcttaca
aatcctgttgaggttcaaatggttttgaagcattttaatagtataaccgcagaaaatgaa
atgaaaccagatgctattcagaagacagaaggtaactttactttcaatgttgctgacgag
tatgtaaattttgctcagcaaaatggtattggaataagaggtcatactcttgtatggcat
caacaaactccagattggttcttcaaacgttcagatgggacggcacttgatcctaataag
ccagaggataagcagcttttgagagatagattaaaaacacatattcaaacacttgttgga
agatatgctggaaagatttatgcatgggacgttgtcaacgaagcaattgacgaaaatcaa
ccagatggatacagaagaagtgaatggtacaggattttaggaccaactccagaaaccggc
ggaatacctgaatatatcatcctggcattccaatatgcacgacaagctgatccaaatgca
aagcttttctacaacgactacaacactgaaaatccaaagaagagacagtttatttacaac
ctggttaaagctctgcatgaaagaggcttgatagacggggtaggtttgcagggtcacata
aatgttgagtctccaacagtgaaagagattgaggatacaataaaacttttcagcacaatt
ccgggtcttgaagttcaaattacagagcttgatatcagcgtttatacaagcagcagccaa
agctataattctctaccacaggatatagccatcaagcaggcacagaagttcagagatatt
ttcgagatgttgaaaaaatacaagggcattgtcacaaatgtaacattctggggtttgaaa
gatgattattcttggctatcaaaaaatggacctaactggccgctgctgtttgacagcaac
taccaggcaaagtatgcatactgggcaattgttgaaccgtcagtgctaccactcgctata
aacaaggcttatgcgaacaatgcacagccaagaattgatggtcttatggataaagaatac
aaaggaactatcccagttaccattcaaaatgatgcagggcaggatattgctcaagtaagg
tcattgtggaatggcaatgagcttagcctttatatcacagtaaacgatacaagtgtagat
gttaacaatgacaaggttatgattttcgttgaccgagacaatggaaagttgccagaacta
aaagatgatgaccactgggtttcaatttcaagaacaggtgcaaagactgagtcaaagatt
ggctatgtgaaagattatgtagtactgcaacagctaagtgggtatgtagtagaagtaaaa
cttcttttgaataatagcttagcagtaaattcaagcataggatttgacattgcagttgtt
gacaatggagtacaatatagctggaacgataagacaaattcacagcttatcggaacagac
acctatggtattttaacaatggcagatagcgtaaaatttgcttcagcaccgaagggaacg
ccaaagattgatgcagaattagatgatgcatggcaaaatgcacaggagataacaactgac
acaaaggtgacagttacaggcacagtatatgactcagcatatgcaaaagcaagaatgatg
tgggatgaaaattgcatctatgtatatgcagttgtgtacgatccacttttgaacaaggca
aacacaaatccttgggaacaggattctatcgaaatatttattgatgaaaacaatcataag
acgccttactatgaaaacgatgatgttcagtacagggtaaactatgagaatacccaaaca
tttggaacaaatggggaggctaaaaactttattacagcaacaaagataatcccaaatgga
tatattgtagaagcacaggtctatatgagaacaactaagctctctgaaggaatggttata
ggatttgatatccaagtaaatgatgcagataatacgggcaaaagagttggcgttctgaca
tggaacgataagattggtaacaattggagagatacgactaagttcggttgcttagagctt
attgctgcacctgtacaacaaccaactgtacagcagccatcaacatcgccttcaacatca
accacaataacatatattataacctcgacaacaccttcccagcaaacacagacgcagcag
caaactcaacaaactcagcagcaaacacagcagcaacaaacaacccagcaacctgctcag
caacagcaacaacagcagacaactcagcagacacaacaacaggagggtgttgttacaaca
aagataaatccaacatcagcaacaactgttaatgtaggaaacgacataaaggttgttgta
ccacagggtgctgttttgggcgcaaatgcaacaatcaaagttgaaaagattgagaagtta
gataaagaaattgggcttgggacacttgttgaaaaaccaatcaaggttacgatagagaac
ggtaatgttgtaaagccagttaagttagaggtaaaggttgagccgcaagtattcaaagat
gataatatcccagttgcatttgcatacgacgaacaaaaaggcaaatggctgcctgttgca
acaaagaaagatgtctcttcagtaaccattacaacaaacaaagtaggtacggtagcagta
gttgttgcaagacttgatgagatttataaggatatatcaaaagataattgggcatatgac
acattcaagaaagctgttacaagtggactcatagtaggatatgaagatatgacactcaaa
ccgacaaagcaagtttcatttgcagaggcggcagtagttgcacaaagagcatttgaaatt
gcgccgaagcaagaaggcacagttaagaatacaccacaatgggcagcccaagcaatcaag
gcattgcttgacaacgaagttattacagaggttgatgatgcaaatagaccgcttacaaga
attgaggctgtagcaattataatgaagttattagaacaaagtggtgtagatatagaaccc
aaagagcttgaatttacagaccttcttgaacaatcttcaatcgatgtagaatacttagca
aaagcatatagtttaggaatagtaaaaggttatccagataagactttcagaccacaaaac
acaataacaagagcagaatttattgcactaattatgagagcattggatgtcttaagaaaa
taa
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