Cryptococcus neoformans var. neoformans B-3501A: CNBB2790
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Entry
CNBB2790 CDS
T01040
Name
(RefSeq) hypothetical protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
cnb
Cryptococcus neoformans var. neoformans B-3501A
Pathway
cnb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cnb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CNBB2790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cnb03400
]
CNBB2790
Enzymes [BR:
cnb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CNBB2790
DNA repair and recombination proteins [BR:
cnb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CNBB2790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HHH
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
4934372
NCBI-ProteinID:
XP_777047
LinkDB
All DBs
Position
2:780604..781930
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AA seq
410 aa
AA seq
DB search
MSRPPFPAGWASVRMDPRNLSLANTLPVGQAFLWHRLPLPASDPPFEEYSRAVHSPPRVV
CLRQSPTHIYYTAVYPSGSAPEPERSNLSTRQWLEDYFQLVRYPDLEALYLDWRRRDPEL
FGKVHVNDRATGIRVLRQDPWECLLAFITSTNNHIPRITSLLHKFSQSFTKPVLTLKHPS
NGILIPYHLFPAPHQIPTRLEKPLRDMGFGYRAPFIEASLQLLRNKFGDKEGDIEAGLVA
WRNEDVDIVRENLIALKGVGRKVADCVMLMCLDKPSLIPIDTHIAHIAARHPAFPSRLKN
KAMSKQVYEETQEFLLGRWGPMGGWCQAVLFAADLPQSRGNIKVKTKVESIVKTVVKTET
SLDNVGNVRRKRGESEEEKLPVLKRTRSATKQAQQVLVGVDVKYDENTDR
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggccgccgttccccgccgggtgggcgtccgtgcgcatggacccccgcaacctc
tcgctggcaaacacgctgcccgtcggccaggccttcctctggcacaggctccccctcccc
gccagcgatccccccttcgaagagtattccagggcagtacactccccccctcgtgtcgtg
tgtctccgccagtcgcccacgcacatatactacactgccgtatatccctccgggtcagcc
ccagagccagagcgcagcaatctctccaccaggcagtggcttgaggactacttccagctg
gtcagatatccagacttggaagccttgtatctcgactggcggcgcagagacccagagctg
tttggtaaagtacacgtcaatgacagagccactgggatccgggtcctcaggcaagatcca
tgggaatgtctcttagccttcatcacatccaccaacaaccacataccacgtataacttcg
ctactgcataaattctcgcaatctttcacaaagccggtgcttactctcaaacatccctcg
aatggtatcttgattccataccacctgttccccgcccctcatcagataccaacaagactg
gaaaaacccctgcgtgacatgggttttgggtaccgcgctccgtttatcgaagcctctttg
cagctgctccgcaacaaattcggggataaagagggagatatagaagctgggctcgtagcg
tggagaaacgaagatgtggacattgtacgtgagaaccttattgcattgaaaggcgtcgga
agaaaagtcgcagactgtgtaatgctcatgtgtctcgataaaccctctctgattcccatc
gatacccatattgcacatattgccgcaagacatcctgcctttccatcccgtctgaagaac
aaggcaatgtcgaaacaggtctatgaggagacgcaggaatttttgcttggtcgttggggc
ccaatgggaggatggtgtcaggccgtcttatttgcggctgatctccctcaatcccgaggc
aatataaaagtgaagacaaaagttgaatctattgtgaaaactgttgtaaagaccgagaca
agcctggataatgttggtaacgtcaggcggaaacgaggggagagtgaagaagaaaaactg
cccgtcttgaagcgtactcgcagtgcgacaaagcaagcgcaacaagtgctagtgggcgtg
gatgtaaagtatgatgaaaatacggaccggtag
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