Cryptococcus neoformans var. neoformans JEC21: CNC06030
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Entry
CNC06030 CDS
T00243
Name
(RefSeq) RNA binding protein, putative
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03013
Nucleocytoplasmic transport
cne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CNC06030
03015 mRNA surveillance pathway
CNC06030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CNC06030
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
CNC06030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
3256347
NCBI-ProteinID:
XP_024512487
LinkDB
All DBs
Position
3:complement(join(1778736..1779464,1779519..1779631,1779714..1779999))
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AA seq
375 aa
AA seq
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MPSRGRSTTPKSLTPDRSPARSYLSRSRSPSRSRSRSPLPRKASLRDADMDAPGDGLYKV
IVVSGLSKNVMKGHLDEIFSEYGRITGIDLPLFKVSGLNKGKAAIEFDTPAAASKAVKCM
DGGQLDGSFLNVQISEHPLPPPQAPSPRRRSPSRSRSRSPPPARRRRSLSRSRSPSPRKG
DRVPSYGRRRSYSRSRSPPRHRGGRDSFPGRNGNGYGPGPSGGRGGGGGRGGFSRGGGPP
PPGGRDNGWRRERSPPVPVRKWGERGAPRRPSPEYGRGARSASRSVSPRGPRGGVRSRSP
VRRRASVSRSRSPVRRRSRSRARSYSRGRSVSMSRSRSRSPLPRKRYSLSRSRSRSSTRS
MSIDRSRSGTRSPRK
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgccttcaagaggccgctcaacgactcccaagtcactcaccccagaccgctctccggcc
aggtcttacctctctcgatctagatctccttccaggtccaggtcaaggtcgccccttccc
agaaaggcatctcttcgagatgccgacatggacgcgcccggagatggcctgtacaaggtc
atcgtggtatctggattgagcaagaatgttatgaagggccatttggacgagatcttctca
gagtatgggcggattactgggattgatttgccgttgtttaaagtttctggactgaacaag
ggtaaagctgcaattgagtttgatacgcctgccgcggcgtcaaaggcagtcaagtgtatg
gatggtgggcagttggatggatctttcctcaatgttcagatttctgaacatcctctccct
cctcctcaagctccttctcctcgtcgtcgatccccgtctcgttcgcgtagccgctctcct
cctcccgcccgtcgtcgccgttcactctcccgatctcgttccccctctccccgcaaaggc
gaccgtgtcccctcttatggacgacgccgttcgtactcccgttcgcgttcgccccccagg
caccgtggtggacgagactcgttccctggacgaaatggtaacggttacggccctggacct
tctggcggtcgcggtggtggtggtggccgaggaggattctcaagaggtggcgggccaccc
cctcccggaggaagagacaatggatggaggcgagagaggagccctcctgtgcctgtgcgt
aaatggggtgagcgtggtgcgcctaggaggccgtctccggagtatggccgcggtgcgaga
tcagcctcgcgttcggtcagcccgcgaggtccacgtggtggtgtgagatcgcgttcgcct
gtcagacgacgcgcaagtgttagtaggagcaggagtccggttaggaggaggagtaggagt
agggcgaggagttactctaggggacggagtgttagtatgagcaggagcaggagcaggtct
cctctccctaggaaaagatacagcctcagcaggagtagaagtaggagcagcaccaggagc
atgagcattgacaggagtagaagcggcaccagaagccccaggaagtaa
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