Cryptococcus neoformans var. neoformans JEC21: CND03230
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Entry
CND03230 CDS
T00243
Name
(RefSeq) conserved hypothetical protein
KO
K14306
nuclear pore complex protein Nup62
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Pathway
cne03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
CND03230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cne03019
]
CND03230
Messenger RNA biogenesis [BR:
cne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
CND03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
Nucleoporin_FG
AAA_13
CHAD
Synaptonemal_3
COG3_N
FPP
DUF724
TACC_C
Motif
Other DBs
NCBI-GeneID:
3256878
NCBI-ProteinID:
XP_570178
UniProt:
Q5KIE7
LinkDB
All DBs
Position
4:join(874905..874908,874954..874989,875093..876759,876816..877015,877074..877419)
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AA seq
750 aa
AA seq
DB search
MAAPNPFAGFGSKPQPSASGTSLFGNTSSQPASGSGLFGSSSTTNNSSATPAASGGGLFG
GGAQTSGGLFGNNTTGANNNNNNSNAAAANSSTPAAPSGGSLFGGFGTGGFGTNNTATGS
TTPASKPAFGGFGQSTTPAAPPPASTGTSLFGGAATGTSTGGGLFGAKPAEGTGAPGAAS
TTGGFTGFGAKPAGTTSAPATGGLFGSKPAESTPAASSSPAPSSGGGLFSFGAKPASTTT
PAAPSLFGSAPAKDASSSTPTSGTPPTTSGGGPFGGGGLFGAKPAAPATEAPKADTATTA
PAAPTSGLFGGVGASKPAEAPKPAAGGFSFGNLGAKPATPSTTEAPKTGGFSFGASAPSA
DKKDEMPAEAPKTGGFSFGAPAAAASNEEKKTDKPAEAPKPGGFSFGNIGTSATTASGDD
KGKAPEAPKAGGFSFGGLGAKTDGDKDKAPAAPTPAAPAAGGLFGAKPADAGQSSTAAPS
ASGGLFGANPNTTAAASTTTPAVPTAPIASAPANVEKPSEPVPNLLRGKALDDIVEGWNK
DLEEQVKEFERQAGEVREWDKILVRNGNQITALRRQVLEAQQTQAAVDEPLNYFEAQQNQ
LESMLDVYEKEIAKMSNDSTRPLAAKMPADREREKAYTLAEDLNKQLDDLSRNLSQMIEQ
VNKISTSQSSLDASTSSLTNRPGTPSASAADAASQMPDDPVSQLSAILGAHLRALSSIDS
SAGKLSTKVGELETKMGSSGSARGWGLPRR
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccaaaccccttcgccggcttcggctcaaagccccaaccctccgcttccggc
acctcactgtttggaaacacttcgtctcaacctgcttctggtagcggcttattcggctcg
tcatccactacaaacaactcctctgctacccctgccgcctcggggggcggcttatttggc
ggtggggcacagacttctggcggtttgttcggaaataacaccaccggtgccaataataac
aataacaactcaaacgcggcagctgcaaacagctcgactcctgcagcgccctctggaggt
agtctatttggaggatttggaactggaggatttggaacgaacaatacggcgactgggtcc
acgactccagcttctaaacctgcttttggtggctttggtcaatccactacaccggccgca
cctcctccagctagtacagggacaagcttatttggaggcgctgctaccggcacaagcaca
ggtggtggcttgtttggtgctaaacctgcagaaggcactggagcacctggcgcagcgtca
acaacgggtggatttacagggtttggagcaaagcctgccggcaccacatctgcgcctgca
acaggtggactttttggttcaaagcctgcagaatctacccctgctgcttcttcttctcct
gcgccctcatccggtggtggcctcttttcattcggtgctaaacccgcctccactactaca
cctgctgctccttcacttttcggctctgctcctgccaaggatgcttcttcatcaactcct
acatctggcacaccacccaccacttctggaggcggaccctttgggggtggggggcttttt
ggtgccaagcccgctgctcctgctacagaggctcctaaagctgacaccgccaccactgcc
ccggctgccccaaccagtggtttgtttgggggagtaggtgcctcaaaacccgctgaagca
cctaagcctgctgctggagggttctccttcggtaacttgggagccaaacctgctactcct
tctaccactgaagctcccaaaacgggaggcttcagctttggagcttctgccccaagcgct
gataagaaggacgagatgccggctgaagcgcccaagacgggaggcttcagttttggcgcc
cccgctgctgccgcttccaacgaagaaaaaaagactgataagcctgcagaggctcccaaa
ccgggtggattcagctttggtaacattggtacatccgcaacaacggcctctggagacgat
aaaggcaaggcgcctgaagctcctaaggctggcgggttcagttttggcggtcttggtgca
aagacagatggtgacaaggataaggctccagctgcgcctacgcctgctgcgcctgctgct
ggtggcttgtttggagccaagcctgccgatgctggtcaaagcagtaccgccgccccttca
gctagcggtggtctctttggtgccaatcccaacactaccgcggcggcttctaccactaca
cctgctgtaccaaccgcccccattgcttccgccccagccaatgtggagaagcccagcgaa
cccgttcccaaccttcttcgtggcaaagccttggatgatatagtggaaggatggaataag
gatttagaggagcaagtgaaggagtttgagaggcaggctggtgaggtgagggagtgggat
aagattttggtcaggaatggtaaccaaattacagctcttagaagacaagtgttggaggct
cagcagacccaagctgctgttgatgaaccgttgaactactttgaggctcagcaaaatcag
ctggaaagtatgttggatgtgtatgagaaggagattgcaaaaatgtcaaacgacagcacc
aggccgttggcggcgaaaatgccggctgatcgagagcgggagaaggcttacacacttgcc
gaggatcttaataaacagctcgatgacctgtctcgtaacctgtcacagatgattgaacaa
gtaaacaaaatttcgacctcccaatcatccctcgacgcaagcacgtcctctctcacgaac
cgtcctgggacaccctccgcgtctgctgctgacgcagcttcacaaatgccagatgaccca
gttagccagctttctgctattcttggtgcgcacttgagggcattgagctcaatcgactcc
agtgcgggcaaactatctaccaaggttggagagttggaaaccaagatgggcagtagcggg
tctgcccggggatggggattgccaaggagatga
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