Cryptococcus neoformans var. neoformans JEC21: CNF04210
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Entry
CNF04210 CDS
T00243
Name
(RefSeq) hypothetical protein
KO
K11360
transcriptional activator SPT8
Organism
cne
Cryptococcus neoformans var. neoformans JEC21
Brite
KEGG Orthology (KO) [BR:
cne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cne03021
]
CNF04210
03036 Chromosome and associated proteins [BR:
cne03036
]
CNF04210
Transcription machinery [BR:
cne03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
CNF04210
Chromosome and associated proteins [BR:
cne03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
CNF04210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
NBCH_WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
3258370
NCBI-ProteinID:
XP_571707
UniProt:
Q5KEU5
LinkDB
All DBs
Position
6:complement(join(1225402..1225502,1225565..1225698,1225756..1225940,1225990..1226760,1226812..1226958,1227009..1227463,1227523..1227728,1227783..1227853,1227920..1227979))
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AA seq
709 aa
AA seq
DB search
MRSEEEEEDDEYYDEHEEEDDERASNGDNGEAEGDEDDADEAIEEASDEEGSDEDNAEED
AEAEDEEEEEEEEDGEAEEDEEDERDEEEEEASEDEADGEDVTMAAAEDDEAGSMHPSQV
SKSAKLPRADLPPPPHLIRRSLFKPAFRAPPAALSVEAIVGIPLPTPVQSLASSTCLSYL
LTGGQDGFVRAYDFWGSVNGSQMMTAQQRSVVGLGEGMNKAGLPRGWWTNEVEGIIGGTV
AKRTEPVYSMACEGDALWALTGTQSGPINLFSLRHSPGHLVHTLKGHTNVVSCMTLLPEE
KGFISGSWDGTVREWDLNTGQTVRTYPSHKAQLSSVSLRPVGFPSSPTPSPRPQALREEE
EEGNDGPATNISISMGPDFFEKKETENSKQEGENGKESSGDKEAELLSEQKPDGDAEMAD
AASAISGTGDSLFGDDDAEGETAPASILPTTIPSPSLPSPPKPKPLGLALPGQRQSSSAP
ISTKETETAPVSAPLFAPQASASYARQGAADVIPVLSPVDWKAYSEDVLLTSSMDGQLVL
IDRRVPSYEGTGTGVGRLLPGEKTPPWCMSACWLSNGNQVLAGRRNGTVEIWDVRKGSSS
TGPNLLRSLKTPVESGPISCVVAFPDGRHIATASQDNIRLWNAAEVFYSEDSAKRSKGKT
PFKIIAGHHGGTISSMIVDRTCRFLITASGDRGWGGESTKAVLIHEVKW
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcgaagaagaagaagaagatgatgagtattatgatgagcacgaggaagaggac
gacgaacgagcgagcaacggtgataatggagaggcagaaggggatgaggatgatgctgat
gaggccatagaagaggcatcggacgaagaaggctcagacgaggacaacgcagaagaagat
gcagaagcggaagacgaagaagaggaggaggaagaggaggacggagaagcagaggaagac
gaagaagatgagagggatgaagaagaagaagaagctagcgaagatgaggcggacggggaa
gatgttaccatggctgccgccgaggacgatgaggcaggctcaatgcatccctcacaagta
tctaaatctgccaaacttcctcgtgccgatcttccacccccaccacacctcatacgccgc
tccctttttaaacccgcttttagggcccctccggcagccctctctgtcgaagctattgtt
ggtatacctcttcccacaccagtacagtcactcgcgagtagtacttgtctctcctaccta
cttacaggcgggcaagatggttttgttcgggcgtatgatttctggggtagcgtcaatgga
tcgcaaatgatgactgctcagcagagaagtgttgttggtcttggggaaggaatgaacaaa
gcagggttaccgaggggatggtggacgaacgaagttgaaggtataataggtgggactgtt
gccaagagaactgagccagtgtatagtatggcatgtgagggtgatgctttgtgggctctg
acaggtactcaatcgggccctataaatcttttcagcctgcggcattcaccgggccatctt
gtgcacacattaaaaggacacaccaatgttgtttcgtgcatgacactattaccggaagaa
aaaggttttattagtggttcttgggatggcaccgtcagagaatgggacctcaataccggt
caaactgttcgtacatacccatcccacaaagcacaactttcttccgtgtcccttcgtcca
gttggatttccctcttctcctacaccttccccccgtccgcaagccctcagagaagaagaa
gaagaagggaacgatggccctgcaacgaatatatcaatatctatgggacccgacttcttt
gagaagaaagaaacggagaactcaaaacaagagggcgagaatggcaaagaatcctctgga
gataaagaagctgaacttttgtcagagcaaaagccagacggtgatgccgaaatggcagat
gctgcctctgcaatctctggtactggtgactctttatttggtgacgacgatgcggaaggc
gaaactgctcccgcctccatcctccctaccaccatcccatccccatctctcccttctcca
cccaaacccaagcctcttggtctcgctcttccaggccagagacaatcttcatcagctccc
atatcaactaaagaaaccgaaactgccccagtctctgcccctctatttgcacctcaagca
tcagctagttatgctcgccaaggtgcggcggatgtcatcccggttctaagtcctgtagac
tggaaagcgtattctgaagatgtgttgttaacgagttcaatggatgggcagttggtgctg
atagatagaagggtaccaagctacgaaggtactggcactggagtgggtaggctgttgcct
ggagagaagacaccaccgtggtgtatgtctgcatgctggttgtcgaacgggaatcaggtc
cttgcaggaaggagaaatgggactgtggagatatgggacgtgcggaaaggctccagttct
actggacccaacttgcttcgctctctcaaaacacctgtggaatcgggtcctataagctgc
gtagtggcattcccagacggtcggcatatcgcaacagcgtcgcaggataacatccgatta
tggaacgccgccgaagtcttctactcggaagactctgccaagcgaagtaaaggtaaaaca
ccatttaagatcattgccggtcaccacggtggtacaatctcgtctatgattgttgaccgt
acgtgtcggttcttgatcacggcaagcggcgatagaggatggggaggagaaagtactaag
gcagtactcatacatgaagttaaatggtaa
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