Cryptococcus neoformans var. grubii H99: CNAG_01807 Help Entry CNAG_01807        CDS       T08175                                  Name (RefSeq) ATP-dependent helicase   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism cng  Cryptococcus neoformans var. grubii H99 Pathway cng03013   Nucleocytoplasmic transport cng03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:cng00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     CNAG_01807    03015 mRNA surveillance pathway     CNAG_01807  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:cng03019]     CNAG_01807 Enzymes [BR:cng01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      CNAG_01807     5.6.2.5  RNA 5'-3' helicase      CNAG_01807 Messenger RNA biogenesis [BR:cng03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      CNAG_01807    mRNA cycle factors     Common to processing body (P body) and stress granule      CNAG_01807 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII UvrD-helicase SLFN-g3_helicase DEAD AAA_16 AAA_22 Helicase_RecD nSTAND3 PhoH ATPase AAA_25 Ribosomal_S13_N UvrD_C_2 Motif Other DBs NCBI-GeneID:  23885481 NCBI-ProteinID:  XP_012052770 UniProt:  J9VUT0 LinkDB All DBs Position 11:974041..978457 Genome browser AA seq 1092 aa AA seqDB search MEFSNFEGASQYGPDIDDNTSLYSSIPPSVVTAPTISGDIASQLGDLNLGETTSGHAAAG QGYIDDFDEEIERNSFGEGVEHACSYCGIHNPQCVVKCLHCNKWFCNSRGNTSASHIVNH LVKAKHKEVILHKESALGDTIPECYNCGSKNVFMLGFIPAKSDTVVVLLCRQPCAALTSS RDINWDTSQWSAIIDDRQFLSWLVKVPSEAEQLRARQISLAQISKLEELWRENPNAKLED AEAQSGEEEMQPILLKYEDAYQYQNILGPLVKVEADYDKRMKESQTENDITIRWDMGLNQ KRLAWFCMPKLESGEVRLAVGDELKLKFAGTTSSVGIKGLQAFNKAGWGSSGDAVWEGVG SVVKIPNNASDEICLELRRNDGVPFDCTHGFSVDFIWKSTSFDRMQAAMKTFAIDEKSVS GYIYHKLLGHEVEPQVLRTQMPKRFAAPNLPELNHSQMSAVKAVLQKPLSLIQGPPGTGK TVTSASIVYHLAKMNPGQVLVCAPSNVAVDHLCEKIHQTGLKVVRLAAKSREALDSSVDF LSLHSQVANADTHHELQKLIQLRNDQGELSQSDERKYKTLVKACEKDILNAADVICTTCV GAGDPRLAKFKFRTVLIDEATQSAEPECMIPLVMGCKQAVLVGDHQQLGPVIMNKKAARA GLSQSLFERLVILGNHPIRLQVQYRMHPCLSEFSSNLFYEGTLQNGVTAPERLRKNVDFP WPVADTPMFFHQNLGTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPNQIGVITPYEG QRSYIASYMQLHGSLKKDLYKEVEVASVDAFQGREKDYIILSCVRSNEHQGIGFLNDPRR LNVALTRAKYGVVILGNPKVLSKHPLWLYLLSHYKEKGCFVEGPLSNLQPSMVQFSRPKK SLAAAMDPFKRRETSAVEFLSKNIGHGQGGQSAAASRFDPAYYRTHNPLSFIPPDAQSVV SQAMTSSAFPLFGSVGGVSGGGGGVGGVGGHGGKNKTYTGYASSVVSQQPMDGGTAGAVL PPRAGQSQFDRFANVVGAGGGMGGVGVGSMGKGRRLSIGSEAASASMYAYGYKAGEDDTQ SIAPSQAGMTEF NT seq 3279 nt NT seq  +upstreamnt  +downstreamnt atggagttttccaattttgaaggggcatcacagtatggtccggacatcgatgataacact tcattatactcgtcaattccgccttcagtagtgacagcaccgactatcagtggcgatatt gctagtcagctaggcgaccttaatctcggcgaaactacgtcaggacatgcagcagccggt caaggctatatagacgattttgacgaggaaatagagcgaaattcatttggagaaggggtc gagcatgcttgcagctactgtggcattcataatccccaatgtgttgtcaagtgtcttcac tgtaataaatggttctgcaattcccgtggcaatacatctgcttcgcatatcgtaaatcat ctagtcaaggcgaagcacaaagaagtgatcctacacaaggaaagcgctcttggagatacc atcccagaatgctacaactgtggcagtaaaaatgtgtttatgctagggttcattcccgcg aaaagtgacactgttgttgttttactctgccggcaaccttgtgcagccttgacgagctcc cgggatatcaattgggatacctcacagtggtcagctatcatcgatgatcgtcaatttctc tcttggcttgtcaaagtaccatcagaggctgaacagcttcgagcgagacaaatttctttg gcccaaatatcaaaacttgaagaactttggagagaaaatcccaatgcaaagcttgaggat gcggaagcacagtctggcgaggaggagatgcaaccaatcttgctcaaatatgaggatgcg taccaatatcagaacattctcggtcctctggtcaaagttgaagctgattatgacaagcgt atgaaagaatcccaaactgagaatgatattacgatacggtgggatatgggtctcaatcaa aagcgtctcgcttggttttgcatgccgaaactcgaaagcggagaagttagattggcggta ggtgatgagttgaagctcaaatttgccgggacgaccagcagcgtcggaatcaaaggtctc caggcgttcaacaaagcaggttggggaagttctggagatgctgtctgggagggagttgga agtgtcgtcaagataccgaataatgcgtcggacgaaatctgcttggagcttcggagaaat gacggggtgcctttcgattgcactcacggcttctctgtcgactttatttggaaatcaacc agtttcgacaggatgcaggcggccatgaagacgtttgccatcgacgagaagagtgtcagc ggctatatctaccataaattgctcggacacgaagttgaaccccaagtgctacgcacccaa atgcccaaacgttttgctgcccctaaccttccggagcttaaccattcgcagatgtccgct gtcaaagccgtattgcaaaaacccctgagtctcattcaaggccctccaggaaccgggaaa acggtgacttctgcttctatcgtatatcacctcgccaagatgaatcctggtcaggttttg gtatgcgcgccttccaacgtagctgttgaccatctttgcgaaaagattcaccagacgggt ctcaaggttgtgcgattagcagccaaatcacgagaagcgctcgattcatcggttgacttt ctctcccttcacagtcaagtagccaacgcagacacgcatcacgagttgcagaaactcatt caactgagaaatgaccaaggagaattaagtcaaagcgatgaaagaaagtataagacattg gtcaaggcgtgtgagaaggacattttgaacgcggcagatgttatctgcactacgtgtgtc ggtgctggtgatcccaggctggcaaagttcaaatttagaacagttttgatcgatgaagct acccagtctgccgagcctgaatgcatgatcccacttgttatggggtgtaaacaagctgta ctggtaggggatcaccaacaattgggaccggtcattatgaacaaaaaagcagctcgcgct ggtctttcgcaatccctgttcgaacgactcgtcatcctgggtaaccaccctatccgactg caagtgcaatatcggatgcacccctgcctttccgagttttcgtccaacctgttctacgag ggcactttgcagaatggtgtcacggcgccggaaaggctgcgtaagaatgtagatttcccc tggccagttgcggacaccccaatgttcttccatcagaacctgggtacagaggaaatatca tcaagcggaacatctttcctcaacagaaccgaagcttccaacgttgaaaagatggtgacc aaattcttcaagtctggcgtcttacccaatcaaattggtgttattacaccttacgaagga caacgatcgtacattgcgtcgtacatgcagctgcacggctcgctgaaaaaggatctgtac aaagaggtcgaggtggcgagtgtggatgcgttccagggtcgtgagaaggattatatcatc ttgagttgtgtgagaagcaatgagcaccagggtatcggttttttgaatgatcccagaaga ctgaatgtggctcttacgcgtgccaagtacggcgtggtgattttgggtaatccaaaggtg ctgagcaagcatcctctttggctttacctcctttcccactacaaggagaagggatgtttt gttgaaggtcctctcagtaaccttcaaccgagtatggtccagttcagccggccgaaaaag tctttggcggcggctatggaccctttcaagagacgtgagacttctgctgttgaatttctc agcaagaatatcggtcatggacaaggagggcaatccgctgccgcaagtcgtttcgaccct gcgtattaccgtacccataaccctctttcctttatcccgcctgatgcgcaatcagtagtc agccaagcaatgaccagctctgctttcccgttatttggcagtgtcggtggtgttagtggt ggcggcggtggtgttggcggtgttggcggccacggtgggaagaacaagacgtatacgggg tacgcttcaagcgtcgtctcgcagcaaccgatggacggcggtaccgctggcgccgtttta cctcctagagcaggacaatcacaatttgacaggtttgccaatgtcgtcggggcgggtggg ggcatgggcggggttggggttgggtccatggggaaagggaggcggctttcgattgggagc gaggcggcaagcgcgtccatgtatgcttacggctacaaggcgggcgaggacgatacgcag agtatcgcaccgagccaggcaggcatgacagagttttag

DBGET integrated database retrieval system