Cryptococcus neoformans var. grubii H99: CNAG_03654
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Entry
CNAG_03654 CDS
T08175
Name
(RefSeq) ATP-dependent DNA helicase
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CNAG_03654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cng03032
]
CNAG_03654
03400 DNA repair and recombination proteins [BR:
cng03400
]
CNAG_03654
Enzymes [BR:
cng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CNAG_03654
DNA replication proteins [BR:
cng03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CNAG_03654
DNA repair and recombination proteins [BR:
cng03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CNAG_03654
Bloom's syndrome complex (BTR)
CNAG_03654
FA (Fanconi anemia) pathway
CNAG_03654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Bac_luciferase
Motif
Other DBs
NCBI-GeneID:
23887130
NCBI-ProteinID:
XP_012047164
UniProt:
J9VKL7
LinkDB
All DBs
Position
2:complement(447639..451692)
Genome browser
AA seq
940 aa
AA seq
DB search
MLALPPSTPAEKPYTNLVNSTQFARNNFRPTKREWRRTMSPQETPSALQRNLKHHWGYND
FRHPQLEICTDALRGCDLIVVAPTGLGKSLCFQLPAITIEHGVTIVVSPLKALMSDQVKD
LTSRGIKAVQLSEYTTLAEHNEVRRQMRMGHPEIRLLYVTPEMLLSDKHRSTFDTAYAQK
QIARLVVDEAHVITEWGTSFRGKYRELGKFRERYYDIPITALTASATKEVRYDIIQTLRI
RKGYGQWVMPFNRRNLFYEIRYQGRGSIEEEEIEVQKNPLDDIADFIEKYRPEATKRNRE
NGIFRICVTGIVYCRTTTACEEVAEFLRNRRIKAMPYYKSLSQTVKDQALAGWKDGSIEC
IVATIAFGMGIDHANVRYIIHYQMPKTFEGYYQETGRAGRDGHISHCILYYSREDAKYLR
GLIEQEDAKQKRNARFKSGDTYAETSSQTLNSFKALQHYMERLGRCRHVGICSYFGEKID
DKDPEIKAAYCQSMCDICKYNAKVRKEARHLTEAIPVASVIDRREPTPIPDQNPKPEPLF
NHNPQESDDTDTDGPFHDELLDVHGPYPDIFEEGLAGTAPPIFQIADPRSSGSHAGNHQN
TPLVPSTNSHVQSSNTISSSMSSKPPSVPLSRTPVLVRDLSSERIAQPIRVREIIHIETG
GEPGPQSLANKRRRAGQGSMLSSSPTSSMEFEEIEREREREMDKVKLRKEKERQEVMARE
RERPVFSSYAQLPGNVKLVQNSEEGTASELKLTREQRMKAERMLNSVKPVRGEGPYACYN
AAPPVARFRKVSSASDKAFKPPILKSPNKVRCDLLTRSARDNALLEISNSLKDSLGHGDL
ARTVLSSWGRSERGSKRITVLQDVARAIERDFAAMSREDPLGFERRITEFRKATKALRSF
EVVDAIAQGDIDLFDDGGPEVGHLKSLEKYLRTWKPERSE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcgttgcctccctcaactccggcagaaaagccatatacaaaccttgtaaactct
acccaatttgcaagaaacaactttcggccaacgaagcgagaatggagaagaacaatgtct
cctcaggagacaccctctgcattgcagagaaatctaaagcatcactggggatataacgat
tttagacatcctcagctggaaatctgcacagacgccttgaggggatgtgatttgattgtc
gtagcgcccacaggtctgggtaaatcattgtgttttcaattaccagcaattactatcgag
cacggcgtcactatcgtcgtatcacctctgaaagcactcatgagcgaccaggtcaaagat
ctcaccagtcgaggcatcaaagcagtacagctcagcgagtacacaacattagctgaacat
aacgaggtgcggcggcaaatgcgaatgggccatccggaaattcgactattgtacgtgaca
cccgaaatgctgttgagcgataagcacaggtcgactttcgatacagcttatgcgcaaaaa
cagatcgcaaggcttgttgtggatgaggcacatgtcatcacagaatgggggacaagtttc
cgaggtaaatatcgtgagcttgggaaattccgcgagcggtattatgacatcccaatcact
gctctcactgcatcggcaacgaaagaagtccgctacgacatcatccaaactctccgaatt
cgcaaaggttacggccaatgggttatgccattcaatcgtcggaatctgttctacgagatc
cgatatcaaggacgaggcagtatcgaggaagaagaaatagaagtacagaagaatcctctg
gatgatatcgccgatttcattgagaagtatcggccagaggccacgaaaagaaatcgcgag
aacggtatcttcagaatctgcgttactgggatcgtatactgtcgtacaacaactgcttgt
gaagaggtagcagaatttttacgaaatcgtcgaataaaagctatgccctattacaagagt
ctttcacagacagtcaaggaccaagcgcttgccggatggaaggacggctccatagagtgt
atcgttgccacaatcgcgtttggaatgggtatcgatcatgcgaacgtaagatacattata
cattatcagatgccgaaaacttttgaaggctattatcaagaaacggggcgagcggggcgg
gatggccacatctcccattgtattttgtactattctcgagaagatgccaagtacctgaga
gggttaatagagcaggaagatgccaaacaaaaacggaatgctcgcttcaagtctggagac
acatatgccgaaacatcttcccagactctcaacagtttcaaagctctacaacattatatg
gaaaggttggggagatgccggcatgttggtatctgcagctactttggagagaagattgac
gataaagatcccgaaattaaagctgcatattgccaatccatgtgcgacatttgtaaatac
aatgcaaaggttcgaaaggaggcacggcacctcactgaggccattccagtcgcatccgtc
attgatagaagagagccgacgcctatccctgaccaaaatcccaaacctgagccccttttt
aatcataatcctcaagagagtgatgatacagatacagatggacctttccacgatgaactt
ctagacgtccacggtccctaccccgacatatttgaggaaggcctagcaggtactgctcct
cccatctttcaaatcgccgatcccagatccagtggatctcatgctggaaaccaccaaaac
acaccacttgtcccgtccaccaatagtcatgtgcagtcatccaataccatttcttccagt
atgtcttccaaaccgcccagtgtgcccttgtcacgcacgcccgtacttgtgcgtgacctg
tcttcggaacgtattgcacagccaatacgagtcagggagattatacatattgagactggc
ggagagcctgggccgcaatcgttggcaaataagcgtcgccgggcgggtcaaggatcaatg
ttatcaagctcgcccacatcaagtatggaatttgaagagattgaaagagaacgagagagg
gagatggacaaggtcaagctgaggaaagagaaggagcggcaggaggttatggctagagaa
agagaaaggccagtcttttcttcctacgcgcagctacccggtaatgtgaaattggtccaa
aactcggaagaaggcactgcttcagaactgaagttgacgagggagcaaagaatgaaggca
gaaagaatgctgaacagcgtcaagcctgtcaggggagaaggaccatacgcttgttataat
gctgcgccgcctgtggcgagattcaggaaagtgtcttcagcgtccgacaaagctttcaag
cctccgatactgaaatcccctaataaagttcgatgtgaccttcttactagatcagcgcga
gataatgcacttttggaaatatctaattctctcaaggattcgttgggccatggtgatttg
gcaagaacggtattgagctcttggggaagatctgagagaggaagcaagcggatcacagtt
ttgcaagatgttgcacgggcgatagaacgagactttgctgcaatgtcacgagaagaccct
ttaggctttgagcgccgaataacagaatttaggaaggcgactaaagctcttcgtagcttt
gaggtcgtcgatgcgatagctcagggcgatattgacttatttgatgatgggggcccggag
gtgggacatctgaaaagcttggagaagtatctcagaacatggaagccggagcgatccgaa
tag
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