Cryptococcus neoformans var. grubii H99: CNAG_04461
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Entry
CNAG_04461 CDS
T08175
Name
(RefSeq) ATP-dependent DNA helicase HFM1/MER3
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
cng
Cryptococcus neoformans var. grubii H99
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cng03036
]
CNAG_04461
Enzymes [BR:
cng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CNAG_04461
Chromosome and associated proteins [BR:
cng03036
]
Eukaryotic type
Meiosis-specific proteins
Others
CNAG_04461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Sec63
Helicase_C
ResIII
AAA_19
AAA_22
Motif
Other DBs
NCBI-GeneID:
23887879
NCBI-ProteinID:
XP_012051543
UniProt:
J9VUU0
LinkDB
All DBs
Position
9:923265..929493
Genome browser
AA seq
1510 aa
AA seq
DB search
MDFEEDQPLWGGSRQEEEDVYFGKFHYADEYESPYHPNDSPTPRYSIGLSSRSLNPGQNL
TGFSTSQFNPSRHTPSPLISGSHSLLPDVAPNRSTRQFTPQNSLARNYSAVLQREQSENY
GDEIWEDEEFVEAANESFTHEIDNAKENDPVITAETIRGREELRNKTVFNKNGKPLVPLS
RLPIDQRKLFKFPCFNDVQSEVFDDVYQSDENLVVSAPTGSGKTTIFELAFLHNLSFRTP
DDSVKPLAVYIAPTKALCNEKAKDWQERLSLALPDVICSEITGDYGNTSTIYNSIRSADL
IVTTPEKFDSMTRRSRNLENMSQRLQLIMIDEVHILRESRGATLEVVISRLKGLGRGIRF
VALSATVPNIDDIARWLGPTRNEYGQLSRGVLVGREVINAKEKRALAVDDMPMAKVYKFG
EEYRPVPLQRETYGIESTGNDWALANRLDKELFPILLRHTAGQSVLVFCPTRKSCQSTAE
SIFHSYEEARAKGLKLPWQHSPGARLELQDKKLTELSTCGIAVHHAGLDYGDRRAIEDGF
RDGKLHMIASTSTLAVGVNLPAHTVVIKGVMAWQGASSGFQEYSDIDIQQMVGRAGRPQY
DTSGVVVVMCERSKVRKYQSMLNSQTVLESCLHENLTEYINSEIGQGTIRSVSSAQEWLR
NSFFHIRIQQNPKHYALSDEKDKPIEGAWEEWLDHYVEKALINLEKDGFIERSDDDTLIP
TETGKIMSSSMISYGTMCSIKAMSPGSTVQDLLEILAGSTEFQDLRIRQGESGFLNKLRI
NEEIRFPFAEAVKSYADKVFLLLQVTFGNIILEDIAKKTELTSPIQTLMAIYNHAPRIVK
AIVQFTLNREYGIAARSALELHRVVVGKAWEDLPTVFRQIPSIGPKSIRVLGQNGVTNFD
QLLDVESEKIQLWLNRGHDFARAIHEQARRMPRFHVTMEEENMDYDGTYNVLNLRVNITP
KAKVIATESRGKRGGFIAQYNLSTLFLSQSGGFISYRRLELKKLIKNKDNSFIIAVTLNK
RCDSVTAIVGVDEVAGCSTVIQYSTNLDESVYPEDLEDDENVEQPPSQRTFVEPTPELEE
ELLPNGNVKCHHSCKDKLACQHICCKSGVPPRKRNRAGARVSGRSNVRTAADRIRETQYS
VESLREELRLVGKGVRRMRQGSQMSRSPSPASNVQTANHKAVIASEMQPNATVVERVRQA
RIVRSTLSPTVATQPRSRSITPVIPPRAVKNEKEIASGEIKEPLFLPGSDGQHKDDPPRK
SIPRSKALISSTSRYFDQPKTSGKAKNASSHKLTTRPVASSGSHPSILDLLPGQATIKHD
GGAVNSHDFGPTHGIFSDDGYETLRESPEMKHSRDFPLPKPSIDWYTEEIMQDDPEESTE
ANKSHAVPNAQAPENWEFNIEEMFADISGSPSSPKQLEEKPKSVLNTNSSPSLKRPARLI
IGGFGRPSIKKQRLHEDHTSSNYSPAQPSAQSENPDILRADGNWPAAQGPSTVPRNEMDE
FEDWYMGESG
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgaagaagatcagccactgtggggtggatcgcgtcaagaggaagaagacgtc
tacttcggaaaattccactatgcagacgagtacgagtctccgtatcaccctaatgattct
ccaacaccaagatacagcattggtctttcttccaggtccctcaatcctggacaaaaccta
accggcttttcaacatcgcaattcaatccctcaagacatactccatctccgctgatttca
ggttctcattcgctccttcccgatgtggctcctaaccgaagtacaagacaattcactccc
caaaactcacttgcccgcaactactctgctgttttgcaacgagaacaaagtgaaaattat
ggagacgagatttgggaagatgaagagtttgttgaagcagccaacgagagctttactcac
gagattgataatgcgaaggagaatgatcctgtaatcacggcagagaccatcagaggtaga
gaagaattgaggaacaagacagtcttcaacaagaatggtaaacctctcgtaccattgtca
aggcttcctatagatcagcgcaaattattcaaatttccctgttttaatgacgtccagagc
gaagtatttgacgatgtatatcaaagtgatgagaatctcgttgtctcggcgcccactggt
tccggaaagacaacaatctttgaactcgcgttcctccacaacttgtcttttagaaccccc
gacgactcggtcaagcctttagcggtatatatcgcgcccactaaagccctttgcaatgaa
aaggccaaggactggcaggaacggctaagtttagcgcttccggatgtgatatgtagcgaa
ataactggtgattatggcaatacatccacaatctacaactctatcaggagcgccgatctg
attgtaactacaccagagaaattcgactctatgacgcgtcgatcccgaaatttagagaac
atgtctcaacgactgcaattaatcatgattgatgaggtccacatcttgcgcgaaagccgg
ggtgccaccttggaagtcgtcatatctcgtctgaaaggacttggtaggggaatacgcttt
gtggcgctcagcgcaacagtgccaaatatcgacgacatcgctcgttggctaggaccgacc
agaaatgaatatggccaactgtcgagaggggttctcgtcggaagggaagtgatcaacgcg
aaagaaaagagggcactggcagttgacgatatgcccatggccaaagtttataaattcggg
gaggaatacaggcccgttcctcttcaacgtgaaacttacggcatcgagtccaccggaaat
gactgggcgctcgccaatagactcgataaagagctcttccccatacttttgagacacaca
gccggacaatccgtcctggttttctgtcctacacgcaagtcatgtcaatcaacagcggag
tcaatattccattcttacgaagaagctcgggcaaaagggctaaaactgccgtggcaacac
tcaccaggcgcccgacttgaattgcaagataaaaaattaactgaattgtccacctgtggc
attgctgttcaccacgccggtttagactacggtgaccgaagagctattgaagatggtttt
cgcgacggtaaacttcatatgatagcgtctacctctactttggccgtgggtgtgaatcta
ccggcgcataccgtagtcatcaaaggcgtcatggcctggcagggtgcatcgtctggattc
caagaatactccgacattgacattcagcaaatggtgggaagggccggccgtccccaatat
gacacttcaggtgttgtggtggtcatgtgtgagcgctctaaagtgcggaagtatcaatcg
atgttaaattctcaaacagtcctcgaaagctgcctacatgaaaatcttaccgaatatatc
aacagcgaaattggccaaggaactattaggtctgtctcatcagcccaggaatggctcaga
aattcattcttccatattcgcattcagcagaaccctaaacattatgctctgtccgacgaa
aaagacaagcctatcgaaggtgcttgggaagaatggctcgatcattacgtcgagaaagct
cttatcaatcttgaaaaggatggctttattgaacgatccgatgacgatacactcatccct
acggaaacgggcaagatcatgagcagcagtatgatttcatacggcaccatgtgctcgatc
aaggcaatgtctcctggatcgaccgtacaagatctgctagaaattttggctggatccaca
gagtttcaagatttgcgaatcaggcagggagagagtggttttctaaacaagcttcggatc
aatgaagagatccgtttcccctttgcagaagctgtgaaaagctatgcggataaagtgttc
cttttacttcaagtgactttcggaaatatcatccttgaggacattgccaagaagacagaa
ctcacttcaccaattcaaactcttatggccatctacaaccatgcccctcgtattgttaaa
gctattgtacagttcactttgaatcgtgaatacggcatagctgcgcgatcggccttagaa
ctccatcgagtagttgtgggtaaagcttgggaagacttgcccaccgttttccgtcagatc
cccagcattggcccaaagtccattcgagtcctaggtcagaacggcgtcactaattttgat
cagcttcttgacgtggaatcggagaagatacagctatggctgaatagagggcatgatttc
gctcgcgcaatccatgaacaagctcgaagaatgccacgcttccatgtgaccatggaggag
gaaaacatggactacgatggcacttataatgttctcaacctgcgcgtgaacataacgccc
aaggctaaggtcattgcaacagaatctagaggcaaacgtggcggttttatagcgcagtat
aatctctcgactttgttcttaagccagagtggaggattcatcagctaccgcagattagag
ctgaagaaactaataaagaacaaggacaatagcttcatcatagcagttacgctgaacaag
cgctgtgatagtgttactgcgatagtcggggtcgatgaggttgctggttgctcgacagta
attcagtacagtacaaatttggatgagtccgtatatcccgaagatttggaagatgatgaa
aatgtagagcagccaccttcacagagaacctttgttgagcctactccagagctggaagag
gaattgcttccgaacggcaatgttaaatgtcatcactcatgtaaggacaaattagcctgc
cagcacatttgctgtaaaagtggggtacccccaaggaaacggaacagagcaggtgcaaga
gtttcgggaagaagtaatgtcagaacagctgcggaccgtattcgtgagacacaatactcc
gtagaatcactcagagaagaattaagacttgtagggaaaggcgttcgtagaatgcgacag
ggctctcaaatgagtcgatccccatcccctgcttcaaatgtacaaactgccaatcataaa
gcagtgattgcctcagagatgcaaccgaacgcgacggtggttgaacgtgtacgccaagcg
cgtatcgtccgtagtacattatctcccacagttgcaactcaacccagatcgagaagcatc
acgccagtcatacctcctagagcagtcaagaatgagaaagagattgcgagtggagagata
aaagaacccttattcctgccagggtcagatgggcagcataaggatgaccctccacgaaaa
tctatccctcgctccaaagcattgattagttcgacatcaaggtattttgatcaacccaag
acatccggcaaggcaaaaaatgcatcttctcacaagctcacaacaaggccagttgcatct
tctggctctcatccttccatcctggatttattgccaggacaagctacaatcaaacatgac
ggcggtgccgtcaattctcacgatttcggacctacccacggcatcttttctgacgatggt
tatgaaacattgcgggagagccccgaaatgaaacattcaagggatttccctcttcctaaa
ccatcgatcgactggtacacagaagagatcatgcaggacgatcctgaagaatccacggag
gctaacaaatcgcatgctgtacccaacgcgcaggcacctgaaaactgggagttcaatatt
gaagagatgtttgcagacatcagcggatccccatcttctccaaaacagctagaagagaag
ccaaagtcagttctcaatacaaattctagcccttcgctcaagcggccagcgcggctcatc
attggcggtttcggacgtccatcgataaaaaagcaaaggctccatgaggaccacacatca
agcaattattcaccggcccaaccttctgctcaatcagagaatcccgatatcttacgtgca
gatggtaactggcctgcagcacaaggaccttcaacagtgccgcggaatgaaatggatgaa
tttgaagattggtacatgggtgagagcggatag
DBGET
integrated database retrieval system
