Cryptococcus neoformans var. grubii H99: CNAG_04541
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Entry
CNAG_04541 CDS
T08175
Name
(RefSeq) cleavage stimulation factor subunit 2
KO
K14407
cleavage stimulation factor subunit 2
Organism
cng
Cryptococcus neoformans var. grubii H99
Pathway
cng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cng00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
CNAG_04541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cng03019
]
CNAG_04541
Messenger RNA biogenesis [BR:
cng03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
CNAG_04541
U7-dependent histone pre-mRNA processing factors
CNAG_04541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
PHM7_cyt
Sigma70_r4_2
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
23887948
NCBI-ProteinID:
XP_012051576
UniProt:
J9VZR8
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Position
9:complement(1123497..1125956)
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AA seq
461 aa
AA seq
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MPPNASKTVFVANIPYDVSEEQLANVFSEAGPVANVEIKFDANTGRSKGYAFVQFYDEAT
ALSAVRNLQDAPVNGRNLRVELSTDEPGPRRRGPGPGAVGVGTAPGAGGPGVGGPSASLG
GSRPMVPAPGPGGAPPFTSAGAGAPGYPPRAPFDPRYPQAHSQSHENTPPPTGVGVRRQG
GDDIDLRMAPQGIDLPPGQKAVDTISKTLAGIAPGQMGDVMTSMKSLIQTNPDQARQLLS
QQPQLAYALFQAMLLLNLVDPSVLSSIQPLAASASTSAAAPGGAAPVVPGPGVGGGGGPG
PRAPSYPPYPPPVQTQGPPGGQQAFRPPPQALYGGAPPLPNQNQNQSQNQNPPYPSYPSG
PGGMPGAGAGAGVPPPTSTPVPPTPHPPHAVPVGPPGGPAPPATGLASLPPAAQAALSTL
PPDQQQMLLQVLQLSPAQIAALDPTQKASVMQLRQQFLGTA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaacgcctctaagacagtttttgtcgcaaatatcccatacgatgtgtccgaa
gaacagctcgccaacgtcttttcagaggctgggcctgtagccaacgtcgagatcaagttc
gatgctaatactggtagatcaaaaggttatgcttttgtgcaattctatgacgaagcaact
gccctctccgctgtgcgcaacctccaagacgcacccgtaaacgggcgtaacctccgtgta
gaactgtcaaccgatgaacctggtcctcgtcggcgcggccctggtcctggtgctgtaggt
gtaggtactgctcctggggcaggtggacctggagtcggtggaccctctgcatcccttggt
ggttctcggcccatggtcccagctccaggcccaggtggtgctcctcccttcaccagcgcc
ggcgccggcgcacccggttaccctccccgggcaccattcgacccccgttacccccaagcc
cactctcagtcacacgagaacacccctcctcccaccggtgtcggcgttagaagacaaggt
ggagatgatatcgatttgaggatggcgcctcagggtatagacttgccccctggacagaag
gcggtggatacgataagcaagactttggcggggattgcgcccggtcagatgggggatgtt
atgaccagtatgaagtcacttatccagacaaacccggatcaagcccgccaactcttgagt
caacaaccccaactcgcatacgccctcttccaggctatgctcctcctcaaccttgtcgac
ccttctgttctgtctagtatccagcctttggcggcttctgcttccacttccgcagctgct
cccggtggggctgcacctgtagtccccggacctggcgtcggtggaggcggaggtccaggt
ccaagagcgcccagctacccaccatatccacctccggtccaaacccaaggtccaccaggc
ggtcaacaagctttccgtcctccgcctcaagctctctatggaggcgcacctcctcttccc
aaccaaaatcaaaatcagagccaaaatcaaaaccctccttacccctcttacccctccggt
cctgggggtatgcctggtgctggtgccggtgctggcgtaccacctcccacttctacaccc
gtgccacccactccgcatccccctcacgctgtcccagttggtccaccgggtggacccgca
ccgccagccacaggattggcatccctcccccccgcagcgcaagccgcgctctccaccctc
cctcctgaccaacaacagatgcttctccaggttttacagctctcgccagcacagattgcg
gcgttggatccaacgcaaaaggcttcagtcatgcaactccgacaacaattcctcgggact
gcttag
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