Cloacibacterium normanense: EB819_08750
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Entry
EB819_08750 CDS
T05730
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
cnr
Cloacibacterium normanense
Pathway
cnr02020
Two-component system
cnr02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cnr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EB819_08750 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EB819_08750 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cnr03021
]
EB819_08750 (rpoN)
Transcription machinery [BR:
cnr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EB819_08750 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
Med9
Baseplate_J
Motif
Other DBs
NCBI-ProteinID:
AZI69954
UniProt:
A0A1E5UE28
LinkDB
All DBs
Position
complement(1914437..1915903)
Genome browser
AA seq
488 aa
AA seq
DB search
MLKQNLQIKLGQKLAPQQIQLMKLIQLHTLEFQEELERELEENPALEVVKEDSGDEDDFS
SLDSDYESEGSESIDTDFDVDEYLYDDEPSYKTASSNFSADDEDFDNESLLTEGQSLYDY
LMEQIHLSSIDDEDLKIAEYIIGNLDNDGYLRREIKAIVDDLAFSQGIYTTQEKVKEILE
NYVQKLDPAGVGARDLQECLLLQIEKKVSRDKAVILAGNILRHQFDALINKHYGKIINKY
DIEEEDLKEALEVISKLSPKVGGNFDTQTITINQEIIPDFVIQIKDGQVIPLLNSRNAPT
LRVSEEYKEILSTYSHDKNSAEHKQAALFIKQKLDAAKWYIDAINQRQNTLMQTISAIVK
LQKEYFLTGDEKNIKPMILKDVADITGFDISTISRVVKSKYADTPSGIILLKNLFSDSLT
NDDGEEVSTKEIKNHLQEVISQEDKRKPLTDDALVDVLKEKGYNIARRTIAKYREQLNIP
VARLRKEL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaacaaaacctacaaataaaattaggacaaaaattagctcctcagcaaattcag
ttgatgaagttgatacagcttcacacgcttgaatttcaggaagagttagagcgtgagtta
gaagaaaatcctgccttggaagtcgttaaagaagatagtggtgatgaggacgattttagc
agtttagactcggattacgaaagtgaaggaagcgaaagcatagatactgattttgatgta
gatgaatatttgtatgatgatgagccttcttataaaaccgcttctagcaatttttctgca
gatgacgaagattttgataacgaaagtttattaacagaaggacaatctttgtatgattat
ttgatggagcaaattcacttgtctagtatagacgatgaagacctgaaaattgcagaatac
atcatcggaaatctagataatgacggatatttgagacgtgagattaaagctattgtagat
gatttggctttttcgcaagggatttataccactcaagaaaaagtaaaggaaattctagaa
aattatgttcaaaaacttgatccagctggagtaggagcgagagatttacaagaatgcttg
ttgctacagatagagaaaaaagtgagccgtgataaagcggtaattcttgcaggaaatatt
ttaagacatcagtttgatgctttaatcaataagcattacggcaaaatcattaacaaatat
gatatagaagaagaagatttaaaagaagcactggaagtgatttctaaattgtctccaaaa
gttggcggtaattttgatacacaaaccatcaccatcaatcaagaaattattccagatttt
gtgattcaaataaaagatggacaagttataccgcttctcaacagtagaaatgcacctaca
cttagagtttctgaggaatacaaagaaattttaagcacctattctcatgataaaaactct
gctgaacataaacaagccgcacttttcatcaaacaaaagttagatgctgcaaaatggtac
atagatgccattaaccagagacaaaatacgctgatgcaaaccatttctgcaattgtgaaa
ttacagaaagaatatttcttaactggagatgaaaaaaacatcaaaccgatgattctgaaa
gacgtagcagatatcacaggatttgatatttctaccatttctagagtggtgaaaagcaaa
tatgcagacacaccaagtggaattattttgctcaaaaatttattctcagattcattgacg
aatgatgatggtgaagaagtttcgaccaaggaaattaaaaaccacttacaagaagtcatc
agtcaagaagacaagagaaaacctcttacagacgacgctttggtagatgttttgaaggaa
aaaggatacaatattgccagaagaaccatcgcaaaatacagagaacaactcaatattcca
gtcgcgagattgagaaaagaattataa
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integrated database retrieval system