Contarinia nasturtii (swede midge): 116339171
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Entry
116339171 CDS
T08003
Name
(RefSeq) LIM homeobox transcription factor 1-beta
KO
K09371
LIM homeobox transcription factor 1
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cns03000
]
116339171
Transcription factors [BR:
cns03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
116339171
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
eRF1_1
Motif
Other DBs
NCBI-GeneID:
116339171
NCBI-ProteinID:
XP_031620744
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MFAMDVKPAISANSVSPTIPDISSLTTTSLTSCTNGSTYNIGKTALAPETTLCGLCIQPI
YDQYIMRVVDTYYHERCLQCCSCSKRLTHSCFARNGKLYCRIDYERIYLKNNCLGCNKRI
CSEEYVMRTASNVFHLKCFVCVVCGSQLQKGEQYVVKQSQLFCRNDYEKEVEMLKGYNDE
YFSEDVFASKIDGRRGPKRPRTILNTQQRRAFKASFDVSPKPCRKVRENLARETGLSLRI
VQVWFQNQRAKVKKIQKKRKQDGKHDNENDSQGENNTANGNTAKSNHESDSDSYSNANLE
PDQNFSIKKEKDNSEDGIKSFELCSNSHHFPADNFSGTDDIQDNAVMGLAYSTFQRILGN
APQVLNPIDRLYSMQNYYFRCNNRQPNEPDDNDGM
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcgatggatgttaaaccagctatttccgccaattcggtttctccgacaatacca
gacatttcatcattgaccacaacaagtttgacatcatgtaccaacggtagtacatataat
attggtaaaactgcattggcacccgaaacaacattatgcggcttatgcattcaaccaata
tacgatcagtatataatgagagtcgttgacacgtattatcatgaacggtgtcttcaatgt
tgttcatgctcgaaacgtttgacgcactcatgttttgctcgcaatggaaaactatactgt
cgaattgattatgaaagaatttatttaaaaaataactgcttgggatgcaataagagaatt
tgttcggaagaatatgtgatgcgaacagcgagcaatgtgtttcatttaaagtgttttgtg
tgcgtcgtatgcggatctcaattacaaaaaggcgaacaatatgtggttaagcaaagccaa
ttattttgccgtaacgattatgagaaagaagttgaaatgctcaaaggatacaatgatgaa
tatttttcggaagatgtgtttgcatcgaaaatcgatggacgacgcggaccaaaaagacca
cgaaccattttaaatacgcaacaacgaagagctttcaaagcatcattcgacgtatcgccg
aaaccatgtcgcaaagtacgcgaaaatttggccagagaaactggattaagtttacgcatt
gttcaggtctggttccaaaaccaacgagcaaaagtgaaaaagatccagaaaaaacgcaaa
caagacggtaaacacgacaacgagaatgattcgcagggagaaaataatacggccaatgga
aacacagcaaaaagcaatcatgaaagtgattcagattcctatagcaacgcaaatctcgag
cccgatcaaaacttttcgataaaaaaggaaaaagacaattcagaggatggcataaaatca
tttgaactatgttcaaattctcatcactttccagccgataatttctccggcaccgatgat
attcaagataatgccgttatggggttggcttattcaacgtttcaacgtattttgggtaat
gcaccacaagtattgaatccgatcgatcgtctgtactcaatgcaaaactattattttcga
tgcaacaatcgacagcccaacgaaccagatgacaatgatggaatgtaa
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