Contarinia nasturtii (swede midge): 116339215
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Entry
116339215 CDS
T08003
Name
(RefSeq) transcription factor IIIB 90 kDa subunit isoform X1
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
cns
Contarinia nasturtii (swede midge)
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cns03021
]
116339215
Transcription machinery [BR:
cns03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
116339215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
BRF1
TF_Zn_Ribbon
Cyclin_N
Dynein_heavy
OrfB_Zn_ribbon
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
116339215
NCBI-ProteinID:
XP_031620824
LinkDB
All DBs
Position
Unknown
AA seq
629 aa
AA seq
DB search
MASGLKCKNCGSSNIEVDSGRGDAVCTNCGSVIESVIIVSEVQFEEAAHGTSSAVGQFVA
ADSKGGATGYGKFHVGVGTESREVTLRKARQGITHLSHQLHLNNHCIDTACNFFKMALMR
HLTRGRKNTHIYAACVYITCRTEGTSHLLIDISDVLQICCYELGRTYLKLSQALCINLPS
IDPCLYIMRFATKLEFGEKTHEVSMTAQRLVQRMMKDSIHSGRRPSGLCGAALLIAARMH
DYNRTPMDIVRIVKIHESTLRKRLIEFGDTPSSMLTLDEFMAVDLEAEQDPPAFKAARKR
DKERLQKLPEHEAEFTDLQREIDSYLDQELRRGSRKRRNDLSESEETDKFIRNSTLDVIN
ECLEENVDDPASDDRLAYNRGIAPDIAAMCAPVVDYKKSDVENEQTQQTETGELDTDGLD
DEEIDGYIMTEDESKYKDEMWNKLNADYLREAKAKEERLAKEKEEGKPEKKKRRVSRKKN
IGPSNTAGEAIEKMLQEKKISTKINYEILKTLTSPSVATTSITTTITDNEPNNTNELKTE
NLNAPSASTSYSSTFKQPRRKQEPVLNIKSSKLKPYELAKTLIKKSEMSEDENAEEDDID
EEIGQDTEQISLASMLNAGDDYYGYDETY
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggattgaaatgcaagaattgtggatcgtcaaacattgaagtggacagtggg
cgaggcgatgcagtttgtacgaattgtggttcggttatcgaatctgttattattgtttcg
gaagtacaattcgaggaagcagcgcatggaacaagttcggccgttggacaattcgtggcg
gccgattcaaaaggtggtgcaacgggttatggaaaatttcatgttggcgttggcaccgaa
tcacgtgaagtgactttgcgtaaagctcgtcaaggtattacacatttgagtcatcagttg
catttaaacaatcattgcatcgatactgcatgcaatttctttaaaatggcattgatgcga
catttaaccagaggacgaaaaaatacacacatctatgcagcttgcgtatacattacatgc
cgaacagaaggcacttcacatttactgatcgatattagtgatgtgttgcaaatatgttgc
tatgaattgggacgtacttatctgaaattgtcacaggcactctgtatcaacttaccatcc
attgatccctgtttatacataatgcggtttgctacaaagttggaatttggtgagaaaaca
cacgaagtttcaatgacggcacaacgattggtgcaacgaatgatgaaagattccatacat
tcgggccgacgaccctctggattatgtggggctgcattgttaatagcagctcgtatgcat
gattacaatcgaacgccaatggatattgtgcgaattgtaaaaattcatgaatcaacattg
cgcaagcgtcttattgaatttggtgatacgcccagtagtatgttaacattggatgaattt
atggcagttgatttggaagccgagcaagatccaccagcatttaaagcagcaagaaaacgt
gacaaagaacgactgcaaaaattacctgaacatgaggctgaatttacggatttgcaacgt
gaaattgatagctatttggatcaagagttgcggcgaggttcaagaaaacgtcgaaacgat
ttatcggaaagtgaagaaacggataaatttatacgaaactcaacattagatgtgataaat
gaatgtttagaagaaaacgttgacgatccagcttcggacgatcgactagcatataatcga
ggtattgcacctgatattgcagccatgtgtgcacctgttgttgattataaaaaatctgat
gtagaaaacgaacaaacacagcaaactgaaactggcgaattggatactgatggtttagat
gatgaagaaatcgacggatatattatgacggaagatgagtcaaaatacaaagacgaaatg
tggaataaattaaatgctgattatcttcgcgaagcaaaagccaaagaagaacgattggcc
aaagaaaaagaagaaggtaaacccgagaagaaaaaacgacgtgtcagtagaaagaaaaat
atcggaccatcgaatacagccggcgaagccattgaaaaaatgttacaagaaaagaaaatt
tccacgaaaatcaattatgagattctgaagacattgacttcaccatctgtagccactact
agcattaccactaccataactgataatgaaccaaacaatacgaatgaactaaaaactgaa
aatctcaacgcaccatccgcgagcacatcttattcaagcacctttaaacaaccgagaagg
aaacaagagcctgtactaaatattaaatcatcgaaattgaaaccatatgagttagcaaaa
acgctaataaaaaagtccgagatgagcgaggatgaaaatgctgaagaggacgatattgat
gaagaaattggtcaagatacagaacaaatttcattggcttctatgttaaatgccggtgat
gattattacggatatgatgaaacctactga
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