Contarinia nasturtii (swede midge): 116347515
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Entry
116347515 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116347515
Organism
cns
Contarinia nasturtii (swede midge)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SET
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
116347515
NCBI-ProteinID:
XP_031633971
LinkDB
All DBs
Position
Unknown
AA seq
1920 aa
AA seq
DB search
MIKKFFFQCFVHKLDIEYISHETTIQVHETKITMVVDSGARHRHPPSASMSTHQHQNNHS
KMQATGMTPKELSENDDHATSLVLDPYLGFTTHKMNIKYRPLKANTTELKNIVAEFIQTQ
DYEKAYQKIMKGEWMPRHIKMNKNKLAQQRLQQHIYRYLRVFSRESGFMIEGCYRYSLED
QKGAKISATRRWEKNDKIECLVGCIAELTEEEERALLHPGKNDFSVMYSCRKNCAQLWLG
PAAYINHDCRANCKFVATGRDTACVKVLRDIEVGEEITCFYGEDFFGDNNSYCECETCER
RGTGAFASRNISMSTMSDDSNASSSLKTIAGNSQSTVGTTGNYRLRETDNRINRIKNKNK
NAIQSGNMSVGTSNRADNDKLMTPLTLKELRQKGLTKYDAEMIIAQQNPNVFNKYSQMTS
VDASKNLDANSKIKNDGSQTKSTDETAKNRTPLSRRRSKRIVSSESGVGTVESTSPAGQS
TKASSSSNSPAVKIKKSPAMSLRERRFKRREATKNLNDGGVAATKAISSNPDTEANDSIA
YNQNHDGASSSQNLCSDHELSNGVAVALQTETTPTKNRSNTINHCRQNLSAKICDLTKRD
DVFIHDTSKTCSTITPKSNGIVKSSSMPSSSLTNGLIPRRSRKGIPHKLDITNGFDDSDV
ELPSGVIETDLKLPPPNTAQQTSINGIVNGTIARKRKISKSVSESESTSSWENKAPPDAQ
CLSTKNTNSAIVLQPEHALMKTPERRLKLTLRMKRSPMLDDLIESGTNLSDGSGNSAYNT
HYAPEYEVFRVEGLLDNSDDDSFDATSPSKQQQKRKKRHKTKAKSHRHRHRKQQSQQHRQ
YDNMEQTSSEDQSERSNHLHFNHSSHGKHSHEPNEYHNHEKMHLDKMQYNNSDNSEIHNG
IRHLNSNCNNCSDHCNSHILQKTSPHTQPMKRLRLIFGNESHTIDIPPITTQSSNTTTST
RLIPTNSNHCYQKLIILCGITKRNMSRLIVKNLPNGLTENRLREIFGKKGHITDVQLKFT
KDGKFRKFGFVGYQSEQVASEARDFFNNTCIDTSRINVEICAALGAETKPQAWSKYAKDS
STYKKLHGIEEDDEIKTKETLAEKEKKKNKNDRLDEIFGEHKKDPKFIEFMKVHGKGNDI
WNNDLGLVEQTEDDIIGKSKQSTTAENEDDSGDDGESEAADEGEDEEESVKLADQSISDL
EYLKSLKSKTTTKTDTKASAKEMKVTDLFTIKIREIPFKIKRKDIVKFFKPVKAFSIRLP
TRDHGFCYVGFKTEKEFNKAMLKNRSFLNGKQVTLIDFTEKNKESALRKENPDNVNGEKG
SKNPKWAKQEEALKNEEDISESGRIFFRNLSYTVNEEQLQELFEKYGPVTEVNLPIDPVT
RKIKGFGTVTFVMPEHAIQAFSELDGSTFHGRLLHLIPAKAKDDDENVNTEGLSFKQKKE
LEMKKAAGSAHNWNTLFLGANAVANTLAKSYQTTKEQILDTATGGSSAAVRLALGETELI
IEMRKFLEANDVVLDAFNQAPKKRSKTVILVKNLPADTQITDIQPLFAKFGLLGRIVLPP
SGITAIVEFLDSSEAKKAFSKLAYTKFKNLPLYLEWAPDNTFKSAATKAMEVDIIKNDVE
KMENVTAKNSKPNPFSKGDKNGRNVKAHKVEDEVFENYVVNDIAEKSTSQEQAADEESDI
EDIQPEPNTTLFLRNLKFSTQVETLREHFRHIGKIYHVQVAMKKDPENPQNKIPLGYGFI
QFRQKASAEKALKTMQTTLIDGNSVELKRSDRTLQIETQTNRRSAKALKQTGSKILVRNI
PFQAKSNEVRELFKAFGELKSLRIPKKMTPGEDAHRGFGFVDFNSKSDAKRAFDALSHST
HLYGRRLVLEWAAPDDGIDELRKRTAEHFHASQSDGKRSRKGVFDASNVTKFAENSGDEE
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaaaatttttttttcaatgtttcgttcataaattagatattgaatacatttca
cacgaaacaacgattcaagtacacgaaactaaaataactatggtggttgactctggtgca
cgacaccgtcatccaccatcggcttcaatgagtacacatcaacatcaaaataaccacagc
aaaatgcaagcaactggtatgacaccaaaagaactgtcggaaaatgatgaccatgccaca
tcacttgtactcgatccatatttgggctttacaacacacaaaatgaacattaaatatcga
ccgctgaaagcgaacacaaccgaattaaaaaacattgttgccgaattcattcaaacacaa
gactatgaaaaagcgtatcagaaaattatgaaaggcgaatggatgccccgtcacattaaa
atgaataaaaataaattggcgcaacaacgtttgcaacaacatatatatcggtatttgcgt
gtttttagtcgtgagtcgggatttatgattgaaggttgttatcgatattcactggaagat
caaaagggagccaaaatatcagcaacacgtcgttgggagaaaaatgataaaatcgaatgt
ttggttggatgcattgccgaattaaccgaggaagaggaacgtgcattattgcatccgggc
aaaaatgatttttccgtaatgtacagttgccgaaagaattgtgctcaactttggctcgga
ccggctgcttatataaatcatgattgtcgagcgaattgtaaattcgttgcaaccggacgg
gatacggcttgtgttaaggtattacgtgacattgaagttggtgaagagataacatgcttt
tatggtgaggattttttcggcgataacaatagctattgtgaatgcgaaacgtgtgaacga
cgcggtactggtgcctttgcatcgagaaatataagcatgagcacgatgagcgatgatagt
aatgctagttcaagtttaaaaacgatcgccggcaacagtcaaagtacagttggtacaacc
ggaaattatcgattacgtgaaacggacaatcgaatcaatcgtataaaaaataaaaacaag
aatgcaatacaaagcggaaatatgagcgtcgggacaagtaatcgtgcagataatgataaa
cttatgacaccacttacacttaaggaacttcggcaaaaaggactaacgaagtacgatgcc
gaaatgataattgcacaacagaacccaaatgtgttcaataaatattcacagatgacatct
gtggatgcatccaaaaatctcgatgcaaatagtaaaataaaaaatgatggtagccaaacg
aaaagcactgatgaaacagcgaagaatcgtacgcctttatcgagacgaagaagtaaacga
attgtatcgtcggaaagtggtgttggtacggttgaatcaacatcaccggccggccaatcg
acaaaggcaagcagttcaagcaattcaccggctgtgaaaattaaaaaatcaccagctatg
tctttgcgtgaaagacgtttcaaacggcgtgaggctacaaaaaacttaaacgatggcggt
gttgctgcaacaaaggcaatcagttcaaatccagacacggaggctaatgatagcattgca
tacaatcagaaccatgatggcgcttcatcgtcacagaacttatgctcagaccatgaactg
agcaacggagtagcggttgcgttgcagaccgaaaccactccgaccaaaaatcgatctaat
accataaatcactgccgacaaaatttatctgcgaaaatctgtgatttaaccaaaagagat
gatgttttcattcatgatacaagcaaaacatgttcaaccatcacaccaaaatcgaatggt
atcgttaagtcatcgtcgatgccatcatcatcgttgaccaatggattaataccgagacga
tcacgtaaagggattccacataaattggacatcacaaacgggttcgatgattcggacgtt
gagcttcctagcggtgtaatcgaaaccgatttaaaactacctccaccaaatacagctcaa
caaacgtcaatcaatggcattgtaaatggaacaattgccagaaaacgaaaaatatcgaaa
agcgtaagtgaatcggagagtacgtcgtcttgggagaataaagcaccacccgatgcacag
tgtttgagcacgaaaaatacaaacagtgccattgttttgcaaccagagcatgcattgatg
aaaacacccgaaagacggttaaaactaactttacgcatgaaacgaagtccaatgttagat
gatcttattgaatctggaacgaatttgagtgatggcagcggtaatagtgcatataataca
cattatgcacccgaatatgaagtgtttcgtgttgaagggctacttgataattcggatgat
gattcatttgacgcaacgtcaccatcaaaacaacaacaaaaacgtaagaaacgacacaaa
acaaaggcgaaaagtcatcggcatcgccaccgaaaacaacagtcacaacaacatcgccaa
tacgataacatggaacaaactagttcagaagatcaatcagagcgcagtaatcatttgcat
tttaatcattcatcacatggaaaacatagtcatgaaccgaacgaataccacaatcatgag
aaaatgcatttagataaaatgcaatacaacaatagtgataacagtgaaattcacaatggc
attcgacatttgaatagtaactgtaataattgtagtgatcattgtaactcgcatattcta
caaaaaacttcacctcatacacagccaatgaaacgtctacggttaattttcggtaatgaa
tcacatactattgacattccaccaataacgacacagtcgtcaaatacaacaacatcaact
agactcattccaaccaactcaaatcattgttaccaaaaattgatcattttgtgtggaatt
accaaaagaaatatgtcacgtttaattgtaaagaatttaccgaatggcctcactgagaat
cgtttgagggaaattttcggcaagaagggccacatcactgatgtacaattgaaatttaca
aaagatggaaaattccgaaaattcggttttgttggataccaatcggaacaagttgccagc
gaagcaagagactttttcaacaacacttgcattgacacgagccgaataaatgtggaaatt
tgcgctgcattgggagctgaaacaaagccgcaggcatggagtaaatacgcaaaagatagt
tcaacatataaaaaattgcacggcattgaggaggacgacgagataaagaccaaggagacg
ctcgccgaaaaggagaagaagaaaaacaagaacgacagattggatgagatttttggcgag
cataagaaagatccgaaattcatagaatttatgaaagtgcacgggaaaggaaacgatatt
tggaataacgatcttggattagttgagcaaaccgaagacgacatcataggtaaaagtaaa
caatccactactgctgaaaatgaggatgatagtggtgatgatggtgaaagtgaggcggcc
gacgaaggagaggatgaagaggaatcagtaaagttggcagatcagtctatcagtgacttg
gaatatttgaaatcgttgaaaagtaaaacaacaactaaaaccgacacaaaagccagtgca
aaagagatgaaagtaactgatctcttcaccattaaaattcgtgaaattccatttaagatt
aaacgtaaagatatcgttaaatttttcaaacccgttaaagcgttctcaatccgcttgccg
acgcgtgatcatggtttttgctatgttggattcaaaaccgaaaaagaatttaacaaagca
atgctcaaaaaccgtagtttcttgaatggcaaacaagtgacgctaatcgatttcacggag
aaaaataaggagtcagcattacgaaaagagaatccggataacgtaaacggggaaaaaggt
tcaaaaaatccaaaatgggcaaaacaagaggaagctctaaagaatgaagaagacatcagt
gaatcgggtcgcatatttttccgaaacttgagttatacggttaacgaagagcaattgcaa
gagctatttgaaaaatatggcccagtaactgaggtgaatttacccattgatcctgttaca
cgaaaaattaaaggatttggcaccgttacgtttgtgatgccagagcatgccattcaggcc
ttctccgaactcgatgggtccacgtttcatgggcgattattgcacttgattccggccaaa
gccaaagatgacgatgaaaacgtgaatacagaaggtttgtcgttcaagcaaaagaaagag
ttggaaatgaaaaaagctgcaggttcagcacataattggaatacattgtttttgggagca
aatgctgtggcaaatacattggcaaagagttatcaaacgactaaagagcaaattcttgat
acagcgaccggtggtagtagtgcagccgttcgattggcactcggtgaaaccgaattaatc
attgaaatgcgcaaattcctcgaagcaaatgatgtcgttttagatgcattcaatcaagcg
ccgaaaaaacgatcgaaaactgttattttggttaaaaatttaccagcagacacacagatc
acggatattcagccattatttgctaaattcgggttattaggccgtatcgttttgccaccc
agtggaattacagcaatcgtcgaatttctagactcaagcgaagcgaaaaaggctttttca
aaacttgcctataccaaattcaagaacttgccactttatttggaatgggcgccagacaat
acattcaaaagtgctgccacgaaagcaatggaagttgatatcattaaaaatgacgtcgag
aaaatggaaaatgttacagcgaaaaactcgaaaccgaatccattctcaaagggagataaa
aacgggcggaatgtcaaagcacataaagtggaagatgaagtatttgaaaattatgtggtc
aatgatatagcagagaaatcaacatcacaagagcaagcagctgatgaggaaagtgacatt
gaagatattcaaccagagccaaatactacgttgttcttgagaaatttgaaattttccaca
caagtcgaaactctgcgagagcatttcagacacattggtaaaatttatcacgttcaagtt
gcgatgaaaaaagatccggaaaatccacagaacaaaattccactgggctatggatttatt
caattcagacaaaaagcatcggcggaaaaagcgttgaaaacaatgcaaacgactttgatc
gatggaaattcggttgagttgaagagaagcgatcgaacactacaaattgaaacccaaacg
aatcgcaggtcagcaaaggcattaaaacaaactggatcaaagattttggttcgcaatatt
ccgttccaagctaaatccaatgaagtacgagaattgttcaaggcatttggtgaattgaaa
tcgttacgaatcccgaagaaaatgacacccggcgaagatgctcacagaggatttggattc
gttgactttaattcaaagtccgatgcaaagagagcattcgatgcattgagccacagtact
cacttgtacggtcgacggttggtattggagtgggctgcaccagacgatggaatcgatgag
ctacgaaaaagaacagccgaacattttcatgcatcacaatcagatgggaaacgcagcagg
aaaggcgtatttgatgctagtaatgttacaaaattcgctgaaaatagcggtgacgaagaa
tag
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integrated database retrieval system
