Contarinia nasturtii (swede midge): 116348834
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Entry
116348834 CDS
T08003
Name
(RefSeq) uncharacterized protein LOC116348834
KO
K14316
nuclear pore complex protein Nup121
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116348834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cns03019
]
116348834
Messenger RNA biogenesis [BR:
cns03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116348834
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
116348834
NCBI-ProteinID:
XP_031635847
LinkDB
All DBs
Position
Unknown
AA seq
1234 aa
AA seq
DB search
MNFDQSNTSANDIPIAESTKIEKSAKTPLKRLRYTLANRFGFHSNPNSPSGTPQTRKNST
SINSSTLTKLDPQVYLDTQSNGFASRVVKYHDESVAKGRNITNKVYRRPGDFPIVNLDKS
EINLNKKQANVPTVSKINIAPPINLVSASNASARSTIFRTGKNYGDSYQIGKLGPIEARK
PIKTVSPSAHNSTQNEPIVPTNNDYDSAPIRSSLEALKEISRKRIHCDEIDGDTNKKQRA
DNDYESNNAQVAITSKRARDRTSPSFSSSAAEMQQKRYKNNDILSSLSSSILMSTPKRSA
LNADVTASKIRRPEFNYDRDDANESVLTNSCAIGKSKSEPSGVVGTSKSDLPHHPSEPIK
PVTKSMSDGYDPKSSTTKTNKLTLFNKVYSATSTTGEKKKPIDDDDENSITFVKPKAKAS
SIFSVNKNRDQKSKLAMMLSFLRGDESKDEVDSVGKPSIDSEKSNQKEEPKSAISSSTSA
NLNTTTSVTFSTATTTSLLNVPSDVTKPSISEPQKFEAKIPTVVTKPIESSATPLISLST
AASTTAPPSTAITTTIQNSPKVSTENAIKPTVTFNLPPTTAATSIATTSASDSAPRLGGF
SFSATQTAFTSPLVAKPTATESLSIAKTEENKPAPPSFSFGLTKSTTNTTLPSFTPPTFG
SNTLPAKTESTPASTQSSIVTAVKPQTGAFQFGNTTSSTPATFNLDSSASKPSVLTFTPN
NNTSTNNTNSTLNQTPSMPFAFGSTSNTSKPDLNTSITSASIAPFAFSATTASTSAPPVF
GSTHTVTTSTNAIPAQNQTSSPPFSFGGAVSAASAAKPQTGAFQFGNTTTTSVVTPSFGS
PSVSTPLFGMANPTSSITATTQSGAFTFGANKSTAGPKFGETTATVTPAFGSTITTTATT
TNLFGNAQNTSVFGTSNLTATQPKTENVFGAANQTTNTPVFGSQNQSNTFGKTPSAPAFG
SNNNLFGNTQSTNAQIQPPPAFGTSNNNLFSTQTTSANLNQSNSLFSTQTTSANLNQSNS
AFGSTTAAAAATPSGVFAFGGQQTPATTTASTGIFGTTNTNTNANAPFVFGQGNSMNLMQ
SNTPSQPSGIFGSKTVENSLTAPPAFGSTTPVAKPQTGAFQFGNTTTPSVPAFGSNSATP
QFGGATNGIGSSFAFSATNQPEAAKPFNFGGPSTAPAESVAPFSFNSPSAAPAQNAFQFN
AAPQQPTTNMFSIGPGSSTTKTGRPMRTATRRMK
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgatcaatcgaataccagtgcaaatgacataccaatcgctgaatcgactaaa
atcgaaaagtcagcaaaaaccccattgaaaagattacgatacacattggccaaccgattt
ggtttccatagcaatccaaatagtccaagtgggacgccgcaaaccagaaaaaattccact
tcaatcaattcgtcaactctgactaaacttgatccacaagtttatttagacacacagagc
aatggttttgcatcgcgtgttgttaagtatcatgatgaaagtgttgcaaaaggtcgaaat
atcacaaataaagtctatcgtcgaccaggcgattttccaatcgttaatttggacaaaagt
gaaataaacttgaataaaaaacaagcaaacgtaccaacagtgtccaaaatcaatatcgca
ccgccaattaatcttgtgagtgcatcgaatgcatcggcacgatcgaccatatttcgtacg
ggaaaaaattatggcgattcgtatcaaattggaaaattgggtccgattgaagctcgaaaa
ccaattaagacagtttcaccatcagcacataattcaacacaaaatgaaccgatcgtcccg
acaaacaacgactacgacagtgcaccaattcgcagttcgttagaagcattaaaggaaata
tcacgaaaacgtatacattgtgatgaaattgatggcgataccaataaaaagcagcgcgca
gacaatgactatgaatcgaataatgcacaagtggctattacatcgaagcgagctagagat
cgtacatcaccgtcattttccagttcggcggctgaaatgcagcaaaagcgatacaaaaac
aacgacatcttaagctcattgagttcaagcattttgatgagtacaccaaaacgaagcgca
ctcaatgcggatgtaacagcgtccaaaattcgtcgtccagaattcaactatgacagagac
gatgcgaatgaaagtgtgctgacgaatagctgtgcgattggtaaaagtaaatcagaacca
agtggtgttgttggaacgagtaaaagtgatttgccacatcatccatccgaaccaataaaa
cccgttacaaaatcgatgtccgatggctatgatccaaaatcgtcgacgacaaaaacaaac
aaactcacattgttcaataaggtgtacagtgctacatcaacgacaggcgaaaagaaaaaa
ccgattgatgatgacgacgagaattcaatcacatttgttaaacccaaagccaaagcatcg
tccatttttagtgtcaataaaaatcgcgatcaaaaatcaaagcttgcaatgatgttaagc
tttttgcgtggcgatgaatcaaaagatgaggtggatagtgttggaaaaccgtcgattgat
tctgaaaaatccaatcaaaaggaggaaccgaaatcagcgatcagctcatctacctcggcc
aatttgaatacaactacttcagtcacattcagtacagcaacaacaacatctctgttgaat
gtaccgtcggatgtcacgaaaccaagcataagtgaacctcaaaaattcgaggccaagatt
ccaacggtggttacaaaacccattgaatcaagtgcgactccgttgattagtctttcaaca
gccgcatctacaactgcacctccaagcacagctataacaaccacaatacaaaatagtcct
aaggtcagtacggaaaatgcaattaagccaactgtaactttcaatttgccgccaacaacg
gctgcaacatcaatcgcaactacgtcagctagtgattcggctccgcggcttgggggtttc
tctttttctgctacacaaacggcattcacatcacctttggttgccaaaccaactgcaaca
gagtcactatcaattgccaaaacagaggagaataagccagcaccaccgtcattctcattt
ggattaaccaaatcgaccacaaacactacgttgccttcgttcactccaccgacatttgga
tcgaatacgttgccagccaaaactgaaagtaccccagcttcaacgcaatcaagcattgta
acagctgtcaaacctcaaacaggtgctttccaatttggaaatacgacatcgtctacaccg
gcgacattcaaccttgatagttcggcatcaaaaccatcagtactcacatttacaccgaat
aacaacacatccaccaacaatacaaactcgacattaaaccagacaccatcgatgccattt
gcattcggaagtacctcaaataccagcaaaccggatttgaatacatcaatcacaagtgcc
tctattgcgccatttgcttttagcgcaacaacggccagtacatcagcgccacccgtattt
ggttctacacacactgtgactacttcgacaaacgctataccggcacaaaatcagacatca
tctccaccattttcatttggtggtgcagtcagtgcagccagtgccgccaaacctcaaaca
ggggctttccaattcggaaatacgaccacaacaagtgtggtaactccttcgtttggatcg
ccatccgttagtactccattgttcggaatggcaaatccaacatcatcaataacggcaacc
acccaaagtggtgcattcacttttggagcgaacaaatcgactgccggtccgaaattcggt
gaaaccacggccacggtcacgcctgcatttggtagcaccatcacaacaacggcaacaaca
acaaatttatttggtaatgctcaaaatacatcggtatttggaacaagcaatctcacagca
acacaacccaaaacagagaatgtttttggtgcggccaatcaaactacgaatactccagtt
ttcggtagccaaaatcaatcgaacacatttggtaaaacaccatcagcgccagcattcggt
tcgaataataacttatttggaaatacacagtcaacaaatgcacaaattcaaccaccacca
gcatttggcacaagcaacaataatttattttcaacccaaacgacatcagccaatttgaat
caatcgaatagtttattttctacccaaacgacatcagccaatttgaatcaatcgaatagt
gcatttggttccactaccgcagcagcagcagcaacgccttctggtgttttcgcatttggt
ggccaacaaactccggcgacgacaacagcatccactggcatatttggcaccacaaatacg
aacaccaatgcaaatgcaccatttgtgttcggccaaggtaattcaatgaatttaatgcaa
tcgaacacaccgagtcaaccaagcggaatctttggtagtaaaacagttgaaaattcatta
accgcaccgcccgcatttggcagtaccacgcctgtcgccaaacctcaaacaggtgctttc
caatttggaaatacgaccacaccaagtgtaccagcttttggatcaaattcggctacacca
cagtttggcggtgccacaaatggaattggttcatcatttgcgtttagcgcaacaaaccaa
cccgaagcagcaaaaccattcaatttcggaggaccatcaacagcaccggccgaatcagtg
gctccattctcatttaattcacccagtgcggcaccagctcaaaatgcttttcaatttaat
gcagcaccacaacaacctaccaccaacatgtttagcatcggtcctggttcgagtacaaca
aaaacaggtcgcccaatgcgaacagctacacgacgaatgaaataa
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integrated database retrieval system
