Contarinia nasturtii (swede midge): 116352181
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Entry
116352181 CDS
T08003
Name
(RefSeq) exportin-5
KO
K14289
exportin-5
Organism
cns
Contarinia nasturtii (swede midge)
Pathway
cns03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cns00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116352181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cns03016
]
116352181
03036 Chromosome and associated proteins [BR:
cns03036
]
116352181
Transfer RNA biogenesis [BR:
cns03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116352181
Chromosome and associated proteins [BR:
cns03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
116352181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
PMP22_Claudin
Motif
Other DBs
NCBI-GeneID:
116352181
NCBI-ProteinID:
XP_031640433
LinkDB
All DBs
Position
Unknown
AA seq
1221 aa
AA seq
DB search
MEMQNDVIRLAGELAVAVEVIMSPNVSQQARMDAYVACEKFKDMSPFCAQAGLYLASGPF
SATVRHFGLQLMENTVKFKWNCISQEEKIFIKENSMKLLSLGVGPAEDSTISHMKDALSR
IIVEMIKREWPQQWTTLLAELSDACTKGESQTELVLMIFLRLVEDVALLQTIESNQRRKD
IYQALTVNMTEIFSFFRRLIELHVNAFRSTTSVGDQKSRAHSRVVQVVLLTLTGFVEWVS
IVHVMAQEGRLLHILCILLNDIAFQIPAAECLAIIVNRKGQVKDRRPLALLFTKDAIEYI
YRAASTSTGIPPDHYYAFLKKLVAVVSGLTSQLVTLWGKEETPVIQPAQFSTFLEIVFTL
ARHPSLTISHGATLIWNILLKHDQISKDPIFFEYIPKVIEVIGPKVLKVQYPTARTLQIS
DSPQSFACIDYDSEEEFAMFFYRCRTDILEVFRQSTLISPLVTFAYCDHWIRLRLQKASN
EQNTTCSVQDPAYLEWEAISVVLDSVLSRILMVNERPSVQSGLLILEECLRIESRDPLIL
SIVLTCISSLFVFLSMSSCQITAGNCIAMSGVSLLPRVLEKIFACVIFQEPTQPIATKNL
RRHSGSLLVKLSIKYPLLLLPVFDQINSTIKNLVAQQSSLSKLEQNLLQEALLVISNNFG
DYERQHLYVSEIIMQSNSLWSSTAAAFGSAREFMRFIGIDKSPVADAQLDPNWLNRTNLM
HALNTVLGVVKRCSWPDDPDRASRGGFVIGFTESGNPIYRNPATPHVVPILPKILCLARI
FNDLYSAEVSSHLAEGFKHINNMLDQEKKNLMGFPPVLVDPMDPSQTKEQTTVSKLQTYM
QTLFDNCYHLLGSAGPSLGRDLYELPGIGTALVNSVFSNLMNVPDHRLRTIIRVFLKPFI
YSCPPALYDSVIMDVLKHVLPLMLNRLTARWQYITALYESGELGEDINDTQEVVEDMLNR
TLTREYLDVLKVALVGASITSTSIERDSSSGALDMDQDDHSMDIPTQTTRATQSALASEV
ISDLGAKLLRDKGTCDSICLTILSAMAWNDTSCSFKAVLLTGPIVRFLSSEDLLTHSLAS
QVLMAVLQGLHIHGQHEANQATLITLGVQVYEIMRPKFPHIVEIMQQIPNTNVADIQKLD
EKILVGAQSKGKIDKYKKDLFKKVTAQLIGKNIGQLFRKEAFIANLRPMTNQLINSTPYT
SLLDSNNQETNIVSQLFSTNS
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgcaaaatgatgtgatacgattggccggcgagcttgctgtcgcagttgaagtg
atcatgagcccaaatgtatcacagcaagcgcgaatggatgcctacgttgcttgtgagaaa
ttcaaggacatgtcaccattttgtgcacaagctggtttgtatttggccagtggtccgttc
agcgcaacagttcgacattttggtttgcaattgatggaaaacaccgtaaaatttaaatgg
aattgcatttcgcaagaggaaaagatttttatcaaggaaaattccatgaaattgttaagt
ttgggtgttggtccggctgaagactcaacaatatcacacatgaaagatgcattatcacgc
atcattgttgagatgatcaaaagggaatggccacaacaatggacaacattattagctgag
ttgtctgatgcgtgtacgaaaggtgaatcacaaaccgaattagttttgatgatattcttg
cgtttggttgaggatgtcgcattactgcaaactatcgaatcgaatcaacgacgaaaagat
atttaccaagcgcttaccgtgaatatgacagaaatttttagttttttccgacgtttaatc
gaattgcatgtgaatgcttttcgaagtacaacttcggtgggcgatcaaaaatctcgtgct
catagtcgtgttgtacaagttgtcttactaacacttactggattcgttgaatgggtttcc
attgtacatgtaatggctcaagagggccgccttttacatattttatgtattttattgaat
gacattgcattccaaatacccgctgctgaatgtttggcaattattgtaaatcgaaaggga
caggtgaaagatcggcgaccattggcactacttttcaccaaagatgcaatcgaatacatt
tatcgtgcagctagtacatctaccggtatacctccggatcattattatgcatttttgaag
aaattggttgctgttgtgtccggtctcacatcacaactggttacattgtggggcaaagag
gagacgccagttattcaacctgcacagttttcaacatttttggaaatcgttttcacactc
gctagacatcccagtctcaccatcagtcatggtgctacacttatatggaatatactattg
aaacacgatcaaatttccaaagatccaattttttttgaatacatacccaaagtaattgaa
gtcattggaccaaaagtattgaaggtacaatatccaacagcacgaacattacagatttca
gattcgccacagtcatttgcatgtatcgactatgacagcgaagaggagtttgcaatgttc
ttctatcgttgtcgaactgatatactggaagttttccgtcagtccacattgatttcacca
ttggttacatttgcctattgcgatcattggattcgactgcgattacaaaaagcgtcaaac
gaacagaatactacgtgcagtgttcaagatccagcctatttggagtgggaagcaatttcc
gtcgttttggatagcgtattaagtcgaattttaatggtaaacgaacgtccgtctgtacaa
tctggtttacttatactcgaggagtgtttgcgaattgaatcccgtgatccattgattcta
tccatagttttaacgtgcatttcatcattatttgtgtttttaagtatgtcatcttgccaa
ataacggctggaaattgcattgccatgagtggtgtatcattgttgccacgtgttttagaa
aaaatcttcgcttgtgtcatattccaagaaccaacgcagcccattgccacaaagaatctg
cgtcggcattctggttcattacttgttaagctcagtataaaatatccattgcttttgctg
cctgtatttgatcaaatcaattcaacaattaagaatttagtggcacaacagagttcattg
agtaaactggagcaaaatctattgcaagaggcattattagtcatttcaaataattttggt
gattatgaacgtcaacatttgtatgtcagtgagataattatgcagagcaattcactgtgg
tcatcaacagcagccgcttttggttctgcacgtgaatttatgcgatttatcggtatcgat
aagtcaccggtagccgatgctcaattggatccaaattggttgaatcgaacaaatttaatg
catgccctaaatacggtgcttggcgttgttaaacgttgttcatggccagatgatccggat
cgtgcatcacgaggtggtttcgtcattggattcaccgaatcaggaaatccaatatatcga
aatccagccacaccacatgttgtcccaattcttccgaaaattttatgcttggcacgcatc
ttcaatgatttgtatagcgcagaagtttcaagtcatttggccgaaggatttaagcatatc
aataatatgctcgatcaagaaaagaagaatttaatgggttttccaccggttttagtcgat
ccaatggatccaagtcaaacgaaagagcaaacaaccgtttcaaagctacaaacatatatg
caaacattatttgataactgttatcatttattgggttctgcgggtccatcattaggccgt
gatctatacgaattaccgggaattggtacggcattagtaaatagtgtcttttccaatttg
atgaatgtgcccgatcaccgactccgaacaataattcgtgtatttcttaagccatttatc
tactcttgtccaccagcgctttatgactctgtcattatggatgttttgaaacacgttcta
ccattgatgctgaatcgcttaactgcacgatggcaatacatcacagctctgtacgaatct
ggtgaattgggcgaagacatcaatgacacacaagaagttgttgaagatatgctgaatcgt
acattgactagggagtatttggatgtgctgaaagttgctttggttggtgcctcaatcaca
tcgacaagtattgaacgtgacagctcctccggtgcattagatatggatcaagatgatcat
tcaatggatattccaacacaaactactcgtgcaacacaatccgcgctcgcttcagaggtg
attagtgatttgggtgcaaaacttttaagagataaaggcacatgtgattcaatttgctta
acgattttaagtgctatggcatggaatgatacatcgtgtagttttaaagctgttctattg
accggacctattgtaagattcttatcgagcgaggatcttttaacacattcactagcgtca
caagtgttgatggcagttttgcaaggattgcatattcacggacagcacgaagcaaatcag
gcaacattgataacacttggtgttcaggtatacgaaattatgcgtccaaaatttcctcac
attgttgaaataatgcagcaaataccaaacacaaatgtggccgacattcaaaaattggac
gaaaaaattctggtcggtgcccaaagcaaaggcaaaattgataaatacaagaaagatcta
ttcaaaaaagtcacagcacagttaatcggcaaaaatataggacaattgtttcgaaaggag
gctttcatcgctaatcttcgaccaatgacaaaccaattgataaattcaacaccgtacact
agccttttagatagcaataatcaagaaaccaatatcgtttcccaattgttttcaacaaat
agttag
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integrated database retrieval system
