Caldicellulosiruptor obsidiansis: COB47_0546
Help
Entry
COB47_0546 CDS
T01293
Name
(GenBank) glycoside hydrolase family 5
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
cob
Caldicellulosiruptor obsidiansis
Pathway
cob00500
Starch and sucrose metabolism
cob01100
Metabolic pathways
cob02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
cob00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
COB47_0546
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
COB47_0546
Enzymes [BR:
cob01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
COB47_0546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cellulase
SLH
CBM_17_28
Motif
Other DBs
NCBI-ProteinID:
ADL41864
UniProt:
D9TIN2
LinkDB
All DBs
Position
635534..637240
Genome browser
AA seq
568 aa
AA seq
DB search
MKRTILRFSKFLKIVILITFTLQIFTVFAKNTPYESRKYPHLLGNQAVKKPSVAGRLRII
EKNGKKYLADKKGEIIQLRGMSTHGLQWYGDIVNRNAFAALSKDWGCNVIRLAMYVGEGG
YASNPGIKEKVVKGIKLAIENDMYVIVDWHVLNPGDPNAQIYKRAKDFFKEIATSFPNDY
HIIYELCNEPNPNEPGVENSLDGWKKVKAYAQSIIKMLRSLGNQNIIIVGSPNWSQRPDF
AIQDPIDDKNVMYSVHFYSGSHPVGGYVFENMKKAFENGVPIFVSEWGTSLASGDGGPYL
DEADKWLEYLNANYISWVNWSLSNKNETSAAFVPYVSGMHYATSLDPGNDKKWDMKELSI
SGEYVRARIKGIAYNPIKRDKGIKCPFKDLNEDNIFYEQVVKLYSKGIIKGTLSSKYLPD
KNITRAELAALCVRLLNLKIEKYDGRFSDVKSSDWYADVVYTAYKNGLFKQEEEKKFFPE
RITKREEVATLAIEVYKRLIGKLEVNVDDIQVVDEDLIKPQYRECVKLAVYLGIIDLDSD
GTFAPSKSVSRGEAATIFYNVLNLAGKL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaactattttaagatttagtaaattcttaaaaatagtgattttaattactttc
actttgcaaatatttactgtgtttgctaagaatacaccatatgaaagtaggaaatatcca
caccttcttggtaaccaagcggtgaaaaaaccatcagttgctggcaggctccgtattatc
gaaaagaacggtaaaaagtatttagctgacaagaaaggcgaaataattcagcttcgtggc
atgagcacgcatggactccagtggtatggtgacattgtaaacagaaatgcgtttgctgct
ctttcaaaagattggggatgcaatgttataaggcttgcgatgtatgtgggtgaaggtggt
tatgcttcaaatccaggcattaaagaaaaagttgtaaagggaataaaacttgcaattgaa
aatgacatgtatgtgattgttgactggcatgtgttaaatccaggcgacccgaatgcccaa
atttataaaagagcaaaagactttttcaaagagatagctacaagttttcccaatgactat
cacataatatatgaactttgtaatgaaccgaatccaaatgagccgggagtagaaaatagc
ttggatggttggaaaaaggtaaaggcttatgcgcagtccatcataaaaatgctcagaagt
ttggggaatcagaacattataattgtaggttcgcccaattggagtcaaagacccgacttt
gcaattcaagatcctatagacgataaaaacgttatgtattcagtacatttttattctggg
tctcatcctgtaggtgggtatgtttttgaaaacatgaaaaaggcatttgaaaatggtgtg
ccaatttttgtgagcgaatggggaacaagtttggcaagcggtgatggtggaccatatctt
gatgaggcggataagtggcttgagtatttaaatgcaaactatattagctgggtgaactgg
tcactatcaaacaaaaatgaaacatcagctgcttttgtcccgtatgttagtggcatgcat
tatgccacttcacttgatcctggcaatgataagaagtgggatatgaaagagcttagtata
tccggagagtatgtgagagcacggataaaagggattgcatataaccctataaagagagac
aaaggaataaaatgtccttttaaagatctcaatgaagataatattttttatgaacaagta
gtaaaactttattcaaaaggaattataaaaggtactttatcttctaagtatttgcctgat
aaaaacatcacaagggctgaacttgctgcactatgtgtaagattattgaatctgaaaatt
gaaaaatatgacggcaggttttctgatgtaaaaagtagtgactggtacgcagatgtggtt
tatacagcatataaaaatggtttgtttaaacaagaagaagaaaagaaatttttccctgaa
agaatcactaaaagagaagaagtagctactttggcaatcgaagtatacaaaagattgata
ggtaaattagaggttaacgtggatgatattcaagttgtcgacgaagaccttataaagcct
caatatagagagtgtgtgaaattagcagtttatcttggtattattgacttggattcagac
ggaacctttgcaccaagtaagagcgtttcgagaggggaggcagcaacaattttttataat
gttttgaacttagcaggcaagctatga
DBGET
integrated database retrieval system
