Cobetia sp. AM6: CLAM6_09520
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Entry
CLAM6_09520 CDS
T08724
Symbol
acrB
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
cobe
Cobetia sp. AM6
Pathway
cobe01501
beta-Lactam resistance
cobe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CLAM6_09520 (acrB)
01503 Cationic antimicrobial peptide (CAMP) resistance
CLAM6_09520 (acrB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cobe02000
]
CLAM6_09520 (acrB)
01504 Antimicrobial resistance genes [BR:
cobe01504
]
CLAM6_09520 (acrB)
Transporters [BR:
cobe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
CLAM6_09520 (acrB)
Antimicrobial resistance genes [BR:
cobe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
CLAM6_09520 (acrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
TgpA_N
SecD_SecF
Motif
Other DBs
NCBI-ProteinID:
BBO55641
UniProt:
A0A5K7Y287
LinkDB
All DBs
Position
complement(1140516..1143647)
Genome browser
AA seq
1043 aa
AA seq
DB search
MARFFIDRPIFAWVLAIIVMLGGIFSILKLPIEQYPSLAPTSITIQATYSGASAQTVEDT
VTQVIEQQMNGIDNLLYMSSTSDSQGNASIELSFDTGTDPDIAQVQVQNKLQLATPRLPQ
SVQNQGVSVTKSSGSFLMVAAFVSDDGSMTKQQLTDYVASDIQDEVARVQGVGETQLFGA
PGAMRVWLDPQKLNNFKLTTSDVTTAISTQNNQIASGQLGNLPAEEGQQLNATIVAQTLF
ETPEQFGNILLKTQEDGSQVYLRDVGRAEKGAETYSTVSRYNGKPAAGLGIKLASGANAL
DTVQAVKDRLDELSAYFPPGMSFKVPYDTSPFVKISIEEVVMTLLEAVALVFLVMLLFLQ
NFRATLIPTIAVPVVLLGTFGVLEVLGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
HEEKLSPLEATRKSMGQITGALVGIGLVLSSVFIPMAFFPGTTGAIFRQFSVTIVSAMTL
SVLVALILTPALCATLLKPTKEKTTGFFGLFNRVFDRSNARYQKGVGGMLKRTGRSMLVY
ALIVVGCGVVFTRISTGFLPDEDQGYLFNQVILPVGSTQEQTLETLEKVEHHFLVDQEDA
VQEMFDVAGFSFAGRGQNMGLAFINLKPWDERERDSFSVVSEAQSYFSTLKEALVFAINP
PPIMELGNASGFDMMLVDRGGIGHKALTDARNQLLGMAGQNPAVTGLRPNGLEDSPQFTL
NIDELKATAMGVSLSEVYSTLSTAWGSTYVNDFLDEGRTKKVYVQAEASARMQPEDLKKW
YVRNTSGEMVPLSAFINGEWTYGSPQLERYNGVSSMELLGQAAPGYSTGEAMQAMEEMVS
QLNNGVALEWTGISLQESQSGGMAPYLYAISLVFVFLCLAALYESWSIPFSVMLVVPLGV
LGALLATWMRGLDNDVYFQVGLVTTIGLSAKNAILIVEFAKDLEVQGRSLIDATMEAVRM
RLRPILMTSLAFTLGAVPLAISTGAGAASRHAIGNGVIGGMISATVLAIFLVPVCYVVVR
RVFGEPKDLKRAHEAARQEDDLV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggccagatttttcatcgatcgccctatctttgcctgggtgctcgccatcatcgtgatg
ctggggggtatcttcagtatcctcaagctaccgatcgagcagtacccctcgctggcccct
accagcatcaccattcaggccacctactccggtgcctccgcccagacggtggaagacacg
gtgacccaggtcatcgagcagcagatgaacggcatcgacaatctgctgtacatgagctcg
acctcggactcccagggcaacgccagcatcgagctgagctttgacaccggcaccgacccc
gacatcgcccaggttcaggtacagaacaagctgcagctggccactccgcgcctgccgcaa
tccgtacagaaccagggtgtctcggtcaccaagtcctccggcagcttcctgatggtcgcg
gccttcgtctctgacgatggcagcatgaccaagcagcaattgaccgactatgtcgcctcc
gacatccaggatgaggtcgcgcgtgtccagggcgtcggcgagacccagctgttcggcgcg
ccgggggccatgcgtgtctggctcgacccgcagaagctcaacaacttcaagctgaccacc
agcgacgtcaccacggccatcagcacgcagaacaaccagatcgcctcgggccagctgggc
aatctgccggcggaagaaggccagcagctcaacgccaccatcgtggcgcagaccctgttt
gaaacgccggagcagttcggcaacatcctgctcaagacccaggaagatggctctcaggtc
tatctgcgtgacgtcggtcgcgccgagaaaggcgccgaaacctacagcaccgtcagccgc
tacaacggcaagcctgctgctggcctggggatcaagctggcctcgggcgccaacgcgctg
gacaccgtccaggccgtcaaggaccgcctcgatgagctgtccgcctacttcccgccgggc
atgagcttcaaggtcccatacgacacctcacccttcgtcaagatctccatcgaagaagtg
gtgatgacactgctggaagccgtggcactggtcttcctggtgatgctgctgttcctgcag
aatttccgcgccaccctgattccgaccatcgcggtgccggtcgtgctgctgggcaccttc
ggggtgctggaagtgctgggcttctccatcaacaccctgaccatgttcgccatggtgctc
gccatcgggctattggtcgacgatgcgatcgtggtggtcgaaaacgtcgaacgcgtcatg
cacgaagagaagctctcgccactggaagcgactcgcaagtcgatgggccagatcaccggt
gcactggtgggtatcggcctggtgctgtcatccgtgttcattccgatggccttcttcccc
ggcaccaccggcgcgatcttccgtcagttctcggtgaccatcgtctcggcgatgacgctg
tccgtactggtggcgttgatcctgacgccggccctgtgcgccaccctgctcaagccgacc
aaggagaagaccaccggcttcttcggcctcttcaaccgggtcttcgatcgctccaacgcg
cgttaccagaaaggcgttggcggcatgctcaagcgcaccggtcgctcgatgctggtctat
gcattgatcgtcgtcggctgtggcgtggtgttcacacgcatctcgaccggcttcctgccg
gatgaggatcagggctatctgttcaaccaggtcatcctgccggtgggctccactcaggag
cagaccctcgagacgctggaaaaggtcgagcatcacttcctggtcgatcaggaagatgcg
gttcaggaaatgttcgacgtcgccggcttcagcttcgccggtcgtggtcagaacatgggc
ctggccttcatcaacctgaagccgtgggatgagcgcgagcgcgattccttcagcgtggtc
agtgaagcacagagctacttcagcaccttgaaggaagccctggtcttcgctatcaacccg
ccgccgatcatggaactgggcaacgccagcggcttcgacatgatgctggtcgaccgtggc
ggcatcggccacaaggcactgaccgacgcgcgcaaccagctgctgggcatggcgggccag
aatccggccgtgaccggcctgcgccccaatggtctggaagacagcccgcagttcacgctc
aatatcgatgaactcaaggcgacggcgatgggtgtctcgctgtcagaggtctactcgacg
ctttccacggcgtggggctcgacctacgtcaatgacttcctcgacgagggtcgtaccaag
aaggtctatgtgcaggcggaagccagtgcccgcatgcagccggaagacctcaagaagtgg
tacgtacgcaacacctccggcgagatggtgccgctgagcgccttcatcaacggcgagtgg
acctacgggtcgccgcagctggaacgctacaacggcgtctcctcgatggaactgctggga
caggcggcaccgggttactccaccggtgaggccatgcaggccatggaagagatggtcagc
cagctcaacaatggcgtcgcgctggaatggaccggcatctcgctgcaggaatcccagagt
ggcggcatggcaccgtatctgtatgccatctcgctggtcttcgtcttcctgtgtctggcc
gcgctgtatgagagctggagcattccgttctccgtcatgctggtggtaccgctgggggtg
ctgggtgccctgctcgccacctggatgcgcggactcgacaatgacgtctacttccaggtc
ggcctggtgacgaccatcgggctctcggccaagaacgcgatcctgatcgtcgagttcgcc
aaggaccttgaagtgcaaggtcgctcgctgatcgatgccaccatggaagccgtgcgcatg
cgtctgcgcccgatcctgatgacctcgctggccttcaccctgggtgccgtgccactggcc
atctcgacgggtgcgggtgccgccagccgtcacgccatcggtaacggcgtgatcggcggg
atgatctcggccacggtgctggcgatcttcctggtgccggtctgctatgtggtcgtgcgc
cgagtcttcggtgagccgaaggacctcaagcgagcccacgaagcggcccgccaggaggat
gaccttgtctga
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