Cobetia sp. AM6: CLAM6_15530
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Entry
CLAM6_15530 CDS
T08724
Name
(GenBank) AraC family transcriptional regulator
KO
K17736
AraC family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobe03000
]
CLAM6_15530
Transcription factors [BR:
cobe03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CLAM6_15530
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GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DJ-1_PfpI
HTH_Tnp_ISL3
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
BBO56242
UniProt:
A0A5K7Y9K1
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Position
complement(1844822..1845913)
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AA seq
363 aa
AA seq
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MPSHDSSATPPDASYAFGLPEDGVLSDQPTSIAPLTATLASPAPADRHQLGIFLLPGFAM
VALFSMIEPLRIANRLRGTRLYQWTLASQDGASVKASNGMVLPVDTARDDLAAVDKLVVC
TSFAPEAYLEDRTLHWLQERSHSGCQLGGVDTGCFVLARAGLLTGKTVTLHWESLPEFSQ
RFDEVDAVESLYEISDDGFFCAGGSAPLDMSLELIRRQHGQTLYQAVREQLILDQGRLPA
SRQRGISQQTADLADPLLRRAITRMENTLEAPLSIEALAEELGLSWRQLERRFQQGLGCT
PRAYHGERRLLHARSLLHDTRHGVTDIALACGFTSHSSFTRAFRRRFGITPTQARRQPPR
PLM
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgccttcacacgattccagcgctacgccgcccgatgcgtcctatgccttcggccttccg
gaagacggcgtgttgtctgaccagcccaccagcatcgcgcccttgaccgccacccttgcc
tcgcctgcccccgctgaccgtcaccaactcggtatcttcctgctgccgggcttcgcgatg
gtcgcgttgttctcgatgatcgagccgctgcgcatcgccaatcgactgcgcggaacacgc
ctgtatcagtggacactcgcaagccaggatggcgcgtcggtcaaggcctccaacggcatg
gtgctgccggtggataccgcacgtgatgacctcgccgcagtggacaagctggtggtgtgc
accagctttgccccggaagcctatctggaagaccgcaccttgcactggctacaggagcgc
tcccatagcggctgccagctcggcggcgtagacaccggctgcttcgtgctggcgcgtgcc
ggcctgctcaccggcaagacggtgacgctgcattgggaaagcctgccggaattcagccag
cgcttcgatgaggtggacgccgtggagtcactgtatgaaatcagtgacgatggcttcttc
tgcgccggcggcagcgccccgctggacatgagcctggagctgattcgccgccagcatggt
cagacgctctatcaggcggtacgcgaacaactgattctcgatcagggccgcctgccggcc
agccgccagcgcggcatcagtcagcagacggccgatctggccgacccgctgctcaggcgt
gcgatcacgcgcatggagaacaccctggaggccccgctcagcatcgaggcactcgccgag
gagctcggcctctcatggcgccagctggagcgccgctttcagcaagggctcggctgcacg
cctcgcgcctatcatggggagcgtcgcctgctgcacgcacgcagcctgcttcacgatacc
cgccatggcgtcaccgatatcgccctggcctgcggtttcacctcgcattcgagtttcacc
cgcgcctttcgccgtcgcttcggcattaccccgacccaggcacgccgtcagccaccacgt
cctctgatgtga
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