Cobetia sp. AM6: CLAM6_25390
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Entry
CLAM6_25390 CDS
T08724
Symbol
liuD
Name
(GenBank) methylcrotonyl-CoA carboxylase subunit alpha
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
cobe
Cobetia sp. AM6
Pathway
cobe00280
Valine, leucine and isoleucine degradation
cobe01100
Metabolic pathways
Module
cobe_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CLAM6_25390 (liuD)
Enzymes [BR:
cobe01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
CLAM6_25390 (liuD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Dala_Dala_lig_C
HlyD_3
Biotin_lipoyl_2
MCC_alpha_BT
ATP-grasp_3
HlyD_D23
GARS_A
Motif
Other DBs
NCBI-ProteinID:
BBO57228
UniProt:
A0A5K7Y888
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Position
3038997..3041267
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AA seq
756 aa
AA seq
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MNANRETDQTLPAGCGEIRKLLVANRGEIAVRVMRTARAMGIQTVAVYSDADADALHVRE
ADEAVRLGPASARESYLDIKKVIAAARKSGADAVHPGYGFLSENAAFVSALAEAGIIFVG
PPQSAIADMGDKSAAKMRMQAANVPLVPGYHGDDQQDDLLQAEADRMGYPVLIKACAGGG
GKGMRVVESAREFAAALASCRRESRAAFGDERMLIEKYLTQPRHVEVQVFCDSYGSGVYL
FERDCSVQRRHQKVLEEAPAPGLTPSLRREMGEAAVRAAREIGYVGAGTIEFLLDAPQPG
SESHGAFYFMEMNTRLQVEHPVTEMITGEDLVEWQLRIARGERLPRQQDELTLTGHSFEA
RLYAEDPDNDFLPATGVLERFRLDLAGAGLSAQQVRLDSGVAEGDEVSMHYDPMLAKLIS
YGPTREQALKTLLRALAALEVRGVTTNRAFLSRLAGHADFRAAELDTRFIERHHDSLFPS
ATLDHDSLAASALLALSRLNEQASHASPSRSTSHRSQALCASPWERRDGWRNGLPHQVRL
ALCLPADTDADERSDKVAHIIARRPVTHASQMNTHTSDTPSMSDSRGDWQLEVTTHCGEE
RQTTSHLGRLTRLEGNAIAVTLDGYRRRFQASHAPARGGEVLVLSSAQQSQSGSTPQGES
RLLWRRADAVDHARHETQATLNAPMNGTVVAQLVAPGSLVPQGTPLMVMEAMKMEHTLNA
PADGEVAQFHFSAGDSVVQGDVLLEFTAAQVESDKE
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaaccgcgagacagaccagaccctccccgccggttgcggcgagatccgcaag
ctgctggtcgccaaccggggcgagatcgccgtacgcgtgatgcgcaccgctcgcgcgatg
ggcatccagacagtggcggtctactccgatgccgacgccgatgccctgcatgtgcgcgag
gccgacgaggccgtgcgtctcggccccgccagcgcccgcgaaagctatctggatatcaaa
aaggtgatcgctgccgcacgcaaaagcggtgccgatgccgtgcatcccggctatggcttc
ctgtccgagaacgccgccttcgtcagcgcgctggccgaggccggcatcatcttcgtcggc
ccgccccagagcgcgatcgccgacatgggcgacaagtccgccgccaagatgcgcatgcag
gcggccaatgtgccgctggtgcccggctaccatggcgatgaccagcaggacgatttgctg
caggctgaagcggaccgcatgggctatccggtgctgatcaaggcctgcgccggcggtggc
ggcaagggcatgcgcgtggtcgagagcgcgcgggaatttgcggcggcgctggccagctgt
cgccgtgaatcccgcgccgccttcggcgatgagcgcatgctgatcgagaaatacctgacc
cagccgcgccatgtcgaagtccaggtgttctgcgacagctacggcagcggtgtctatctg
ttcgagcgcgattgcagtgtccagcgtcgccaccagaaggtgctggaagaggcccccgca
ccggggctgacgccgtcgctgcgccgtgagatgggcgaggccgccgtgcgggcagcgcgc
gagatcggctatgtcggtgccggcaccatcgagtttctgctcgacgcaccgcagccgggc
agcgaaagccacggcgccttctacttcatggagatgaacacccgcctgcaggtcgagcac
ccggtgaccgagatgatcaccggcgaagacctcgtcgaatggcaactgcgcatcgcgcgg
ggcgaacgcctgccgcgccagcaggatgagctgacgttgaccggccacagcttcgaggct
cgcctctacgccgaagacccggacaacgacttcctgcccgccaccggtgtgctggaacgc
ttccgactggatctggcaggggccgggctgagcgcccagcaggtacgcctggacagcggc
gtcgccgagggcgatgaagtctcgatgcattacgacccgatgctggccaagctgatcagc
tacgggccgactcgcgaacaggccctcaagacgctgctgcgcgcgctggcagcgctggaa
gtgcgcggcgtcaccaccaatcgcgccttcctgtcccgcctggcgggtcatgctgacttc
cgcgccgccgagctggatacccgcttcatcgaacgccatcacgacagcctgttccccagc
gcgacgctggatcacgacagcctggcggccagtgccttgctggcgctctcgcgcctgaat
gagcaagccagccacgcatcaccttcgcgctccacatcacatcggagccaagcactctgc
gccagcccgtgggagcgccgcgatggctggcgcaatggcctgccacaccaggtgcgcctg
gcgctgtgtctgcccgctgacaccgatgccgatgagcgcagcgacaaggtggcgcatatc
atcgcgcgccgccccgtaacacatgcctcccagatgaatacgcacacctcagatacgcca
tcgatgagcgattcgcgcggcgactggcagctggaagtgaccactcactgcggcgaagaa
agacagaccacaagccatctcggccgactcactcgccttgaaggcaacgccatcgccgtg
acgctggatggctatcgtcgtcgcttccaggcaagccacgcgccggcgcgcggcggagaa
gtgctggtgctgtcgtcagcgcagcaaagccagtccggcagcactccacagggggaatca
cgcctgctgtggcggcgtgccgacgccgtggaccatgcgcgccatgagacccaggcgacc
ctgaatgcgccgatgaatggcaccgtggtcgcgcagctggtcgcgccgggcagccttgtc
ccgcagggcacgcccttgatggtgatggaggcaatgaagatggagcacaccctcaatgcc
cccgccgatggcgaggtcgcccagttccacttctcggccggtgacagcgtggtccagggc
gatgtgctgctcgagttcacggccgcgcaggtcgagtcggacaaggagtag
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