Cobetia sp. AM6: CLAM6_28630
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Entry
CLAM6_28630 CDS
T08724
Name
(GenBank) transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cobe03000
]
CLAM6_28630
Transcription factors [BR:
cobe03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CLAM6_28630
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Crp_2
MarR_2
HTH_10
HTH_23
HNH_repeat
HTH_IclR
HTH_3
Sigma70_r4
Sigma70_r4_2
HTH_31
TetR_N
Sigma54_DBD
HTH_Tnp_ISL3
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BBO57552
UniProt:
A0A5K7YCZ1
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All DBs
Position
3424183..3425226
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AA seq
347 aa
AA seq
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MSMPSQPHKASRLKRVTLADIAARLGVTKVTVSRALNQPEKVSAAMRERVTECARELGYM
PNRQAGSLASGHSRLIALLIPSLSNAVFSELHRGLEAPLAAAGYQLLIGHTGYSMQEEER
LIETWLSFGIDGLVLCGSRHSPRTREMIARSGCAVVECMEKRETPLDMAVGLDQHAAGRA
MTEAMIALGHRHIGFLGARMDRRVEQRLGGWRAAMEAAGLSQQALLTTDAPSSVRMGGKL
LDEMLTRWPETQAVFCCNDDLAAGGLFECQRRGLSVPDQLALAGFNGLEMTRGTWPPLAS
VVTPRREIGERAATLLLARLNGDLDATPHGLWEDLGFSLQTGGSLAP
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgccctctcagcctcacaaagcttcccgcctcaagcgcgtcaccctggccgat
atcgccgcccgactgggcgtcaccaaggtcacggtgtcgcgcgcgctcaatcagcccgag
aaggtctccgccgcgatgcgcgagcgggtaaccgaatgcgcccgcgagctgggttacatg
cccaatcgtcaggccggcagcctcgccagcggtcactcgcgactgatcgcgctgctgatt
ccgtcgctctccaacgccgtgttctcggagctgcatcgcggcctggaagccccgctggcc
gccgcgggctatcagctgctgatcggccataccggctattcgatgcaggaagaggagcgc
ctgatcgagacctggctctccttcggcatcgacgggctggtgctgtgcggcagtcgccat
agccctcgtacccgcgagatgatcgcgcgctcgggctgtgcggtggtggagtgcatggag
aaacgcgagacgccgctcgacatggcggtgggactggaccagcacgccgctggccgcgcg
atgaccgaggccatgatcgccctgggccatcgccatatcggttttctcggtgcgcgcatg
gaccgccgcgtcgaacagcgcctgggcggctggcgtgcggcgatggaggccgccggcctg
tcgcagcaggcgctgttgaccaccgatgccccctccagcgtgcgcatgggcggcaagctg
ctcgacgagatgctgacccgctggcccgagacccaggccgtgttctgctgcaatgacgac
ctggcggccggcgggctgttcgagtgtcagcgccgcggcctgtcggtgcccgaccagctg
gcgctggccggcttcaacggcctggagatgacccgcggcacctggccgccgctggccagc
gtggtcacgccacgccgcgagatcggcgagcgcgccgccaccctgctgctggcgcgcttg
aacggtgatctcgacgccacgccccacggcctgtgggaagacctgggcttcagtctgcag
acaggcggcagtctggcaccgtga
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integrated database retrieval system
