Cobetia sp. AM6: CLAM6_34170
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Entry
CLAM6_34170 CDS
T08724
Symbol
rph
Name
(GenBank) ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
cobe
Cobetia sp. AM6
Brite
KEGG Orthology (KO) [BR:
cobe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cobe03016
]
CLAM6_34170 (rph)
Enzymes [BR:
cobe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
CLAM6_34170 (rph)
Transfer RNA biogenesis [BR:
cobe03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CLAM6_34170 (rph)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
BBO58106
UniProt:
A0A5K7Y6J5
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All DBs
Position
complement(4132589..4133335)
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AA seq
248 aa
AA seq
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MSEANVTRPSGRTPEQPREIRLTREFTRHAEGSVLVEFGETRVLCTASVVAGVPRWLRGS
GKGWLTAEYGMLPRATHTRNDREAARGKQGGRTVEIQRLIGRALRAAVDLKKLGEYTITI
DCDVLQADGGTRTAAITGGCVALVDALQGLQRERKIKTDPLVSLVSAVSVGIYKGVPVTD
LDYPEDSKADTDMNVVMAEGKGLIEVQGTAEGAAFDRAELNALLDLAERTGEQLFAAQRT
ALGMPADA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagccaacgtgacccgtcccagtggccgtaccccggagcagccgcgcgagatc
cgcctgacccgtgagttcactcgtcacgccgagggttcggtgctggtggagttcggggag
acccgcgtgctgtgcaccgcctctgtcgtggcgggcgtgccgcgctggctgcgcggttcc
ggcaagggctggctgaccgccgagtacggcatgctgccgcgtgcgacccatacccgtaat
gaccgtgaagcggcgcgtggcaagcagggtggccgcacggtggagatccagcgtctgatc
ggccgtgcgctgcgcgccgcggtggacctgaagaagctgggcgaatacaccatcaccatc
gattgcgatgtgctgcaggccgatggcggcacgcgtaccgcggcgatcaccggtggctgt
gtggcactggtcgatgcgctgcagggcctgcagcgtgagcgcaagatcaagaccgacccg
ctggtgagtctggtcagcgccgtctcggtcggcatctacaagggcgtgccggtcaccgat
ctcgactacccggaagacagcaaggccgataccgacatgaatgtcgtgatggccgaaggc
aaggggctgatcgaggtgcagggcacggccgaaggcgcggccttcgatcgcgccgagctc
aatgccctgctggatctcgccgagcgtaccggtgagcagctgttcgccgcgcagcgcacc
gcactcggcatgccggccgacgcctga
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integrated database retrieval system
