Capnocytophaga ochracea: Coch_0538
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Entry
Coch_0538 CDS
T00961
Name
(GenBank) hypothetical protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
coc
Capnocytophaga ochracea
Brite
KEGG Orthology (KO) [BR:
coc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
coc02000
]
Coch_0538
Transporters [BR:
coc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Coch_0538
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
AbbA_antirepres
SusD-like_3
Motif
Other DBs
NCBI-ProteinID:
ACU92097
UniProt:
C7M7E0
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All DBs
Position
complement(674506..676071)
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AA seq
521 aa
AA seq
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MKKIYIIIAIVALLSIACSKDSLKLQNPNEPGLENLETEEGIQKFALGVYAPMRGGVNYY
AWFALTLHNLMGDATTAVALNFGFCYSNQIFSITRPDGSVIKSSLLGEKTQGAVLKQLNI
RENGNENAFNNEWMAMYGVLGHCNLALKLLDNNEVVFRDNAEVKKKTYQAWFLWWKAFAY
SRIGSLYAKGVITNEYNVLSNNYQSHEAIITEANRIFEEAKAILATIPEGDTTYSGLIDT
FIPSQFKEGNGGVITPKMFIRNINTYIARNLLVNKYASELTSSELSQIETLVNSGIQQGD
KIFIMRSITPSSLCFVSETAWTPYRILVGWEYLSERLVQDFKAGDNRYTRNVLRRSSALF
NPRNRGYGIGTRYTLKDGGDYASTSAGVVELPFAGTYEENQLMLAEVKIRNNNIDGGLAH
IDAVRTYQKAGLTAVTGTGLTKEQALEELRKERRIGLFLKGTSFYDARRWGILKPVAQGG
GRTNANVVVATDGTTEACTIDYQYLEWFDVPASETDFNPLP
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagatatatataataatcgctatagtagccttactatctattgcttgtagtaag
gactctcttaaactacagaatcctaatgaacctggtttggaaaatcttgaaacagaagaa
ggtatccaaaaatttgccttaggggtgtatgctccaatgagaggaggggttaattattac
gcttggtttgcgcttacccttcataatttgatgggagatgctacaactgctgtcgctctt
aattttggattctgttatagtaaccaaatatttagcattacacgtcccgatggctctgtt
attaaatcttctttgttaggagaaaaaactcaaggagcagtgttgaaacaattaaatatc
agagaaaatgggaatgaaaatgctttcaataatgaatggatggctatgtatggtgtatta
ggacattgtaatttagctcttaaactccttgataataatgaggtggtctttagagataac
gctgaggtaaagaaaaaaacctaccaagcttggttcttatggtggaaggcttttgcttac
tctcgtattggttctctttatgcaaagggagtgattactaatgaatacaatgtgcttagc
aataactaccaatcacacgaagcaataatcactgaagccaatcgtatctttgaagaagca
aaagcaatcttagctactattcctgagggagacactacttatagtggtctcattgatact
tttattccttctcagtttaaagaaggcaatggaggggtcattactcctaagatgtttatc
cgcaatatcaatacctatatagcacgtaatcttttggtaaacaaatatgcttcagagctt
acttcatctgaattatcacagatagaaaccttagttaatagtggtatccagcaaggagat
aagatttttataatgcgatctatcacacctagcagtttgtgttttgtaagtgaaaccgct
tggactccttataggattctcgtaggatgggaatacctttcagagcgtttagtacaagat
tttaaggctggagataatcgctatacccgaaatgtactaagaagaagtagtgctcttttt
aaccctcgaaatcgtggttatggtataggtactcgctacacccttaaagatggtggtgat
tacgcaagtactagcgctggtgttgtagaattgccttttgcaggtacttatgaagaaaac
caattaatgctcgctgaagtaaaaatcagaaataacaatattgatggtggtctggctcac
atagatgcagtgcgtacttaccaaaaagctggacttacagctgtgacaggtacaggctta
accaaggaacaagctcttgaagaactccgcaaagaacgtcgtataggcttgttccttaaa
gggacttctttctatgatgcacgtcgttggggcattctcaaacccgtagctcaaggagga
ggtcgtaccaatgccaatgtagtagtcgccaccgatggtactaccgaggcttgtacaata
gactatcaatacttagagtggtttgatgttcctgcaagtgaaactgattttaaccctcta
ccctaa
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