Comamonas odontotermitis: LAD35_10400
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Entry
LAD35_10400 CDS
T07833
Symbol
mnmC
Name
(GenBank) FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
codo
Comamonas odontotermitis
Brite
KEGG Orthology (KO) [BR:
codo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
codo03016
]
LAD35_10400 (mnmC)
Enzymes [BR:
codo01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
LAD35_10400 (mnmC)
Transfer RNA biogenesis [BR:
codo03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
LAD35_10400 (mnmC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
Pyr_redox_2
FAD_binding_2
MurD-like_N
Pyr_redox
HI0933_like
3HCDH_N
FAD_binding_3
AlaDh_PNT_C
ApbA
XdhC_C
GIDA
TrkA_N
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
UBB15296
LinkDB
All DBs
Position
2252278..2254362
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AA seq
694 aa
AA seq
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MSEIVQWMEDGTPYSPRFGDRYRSEAAHAVQQAEQVFLAGVGLPAAWAGQPQWRILETGF
GFGLNFLATWHAWRGDAARSQLLHFVSTEAFPVSADDLLRHAEQFPHLQAMARELAAQWW
GLLPGVHRLRFDGGRVLLTLLVGDTQAMLRQQDMVVDSIYLDGFSPARNPQMWSLHTLKA
VARCARRGTRLATWTIAAQVRKDLAQCGFQVNKVPGVPPKRDNLHATFDPAWEPRKAPLW
ALGTHAVKATDLAAPLLPTAVVIGAGIAGAACAHQLALRGWQVTVLDAAPQPAAGASALP
AGIFAPHTSSDDSVLSRITRAGVRTTWQWARQLLQAGEDWAPTGVLERRHLATPRDETAA
HAEIAPDHAASRRTGAHERPPAWSTDPALAQAAAAWSTPASADVLAAQGLPADDAALWHT
HAGWLRPAALVQALLQAPGIRFVGQAQMAQIKASPDAATWSVRDAAGAELARAHLVVVCA
GPHSNAVLAAMPEASAPQPLPLQSIRGQVSWATYGNGEQPARHHPVNGHGSWVPFFKAPA
GASGAAGPAWVMGSSFERDVTELPPSPADAARAHGDNWAKLQTLLPAASQVYTASFATAR
TWAQVRCASVDRLPVVGPRPVDGDASDSNDSLNGRMPPWVCTAMGSRGLSWALLCAELLV
ARLHDEPLPVTNGLAKALSTDRTLPARSERSAQP
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagatcgtgcaatggatggaagacggcacgccctacagcccgcgctttggcgac
cgctaccgcagcgaagccgcgcatgcggtgcagcaggccgaacaggtctttctcgctggc
gtggggttgcccgcagcctgggcgggccagccgcagtggcgtattctggaaaccggtttc
ggctttggcctgaattttctcgccacctggcatgcttggcggggtgacgctgcacgcagc
cagttgctgcatttcgtatcgaccgaggccttccccgtgagtgccgacgacctgctgcgc
catgccgagcagtttccgcatctgcaggccatggcacgggagcttgccgcgcagtggtgg
ggcctgctgcccggcgtgcaccgcctgcgctttgacggcggccgcgtgctgctgaccctg
ctggtgggcgatacccaggccatgctgcgccagcaggacatggtggtcgacagcatctac
cttgacggcttcagccctgcgcgcaacccgcagatgtggagcctccacaccctcaaggcc
gtggcccgctgcgcacggcgcggcacccgccttgccacctggacgattgccgcccaggtg
cgtaaggatctggcgcagtgcgggtttcaggtcaacaaggtacccggtgttccgccaaag
cgcgacaacctccacgccacgttcgaccccgcatgggagccgcgcaaggcgccgctgtgg
gcattggggacgcacgctgtcaaagcaacggatctggcagcaccgctcctgcccaccgcc
gtcgtgattggcgcaggaatcgctggcgctgcctgcgcgcaccaactggccctgcgcggc
tggcaggtaacagtgctggatgccgccccccagcccgccgcaggcgcctccgccctgccc
gccggcatttttgcgccgcacaccagcagcgacgacagcgtgctttcacgcatcacccgc
gcaggcgtgcgcaccacctggcaatgggcgcgccagttgctgcaagcaggtgaagactgg
gccccgaccggggtgctggagcgccgccatctggccaccccgcgcgacgagaccgccgcg
catgccgaaatcgcgccggaccacgctgccagccgccgaaccggcgcccacgagcgcccg
ccggcctggagcacagaccctgccctggcgcaggccgcagcggcctggagcacccctgcc
agcgcagacgtgctggccgcacaaggtctgcccgctgacgacgcggcgctctggcacacg
catgcaggctggctgcgcccggcagccctggtgcaggcattgctgcaggcgccgggcatc
cgctttgtgggacaggcgcagatggcgcagatcaaggcttcaccggatgcggcgacctgg
tcggtgcgagacgcggcaggcgcagagctggcccgcgcgcacctggtggtcgtctgtgcg
gggccgcattccaatgcggtattggccgccatgcccgaagcaagcgcgccccagccattg
ccgctgcaatccattcgcggccaggtcagttgggccacctacggcaatggcgagcagcct
gcccggcatcacccggtcaacggccacggcagctgggtgcccttcttcaaagcgccagcc
ggggcctctggcgcggcagggccagcctgggtcatgggatcgagttttgagcgcgatgtg
acagaactgccaccatcccctgccgatgccgcccgcgcgcatggcgacaactgggccaaa
ttgcagaccctgctgcccgcggccagccaggtctacacggcctcttttgctactgcccgc
acctgggcccaggtgcgttgcgcctcggtagaccggctgcccgtcgtcggccccaggcct
gtagacggtgacgccagcgattcaaacgactccctcaatggccgcatgccgccctgggtc
tgcaccgccatgggatcgcgcggcctcagttgggcgctgctgtgcgccgagttgctggtc
gcccgcctgcacgacgagcccctgccggtcaccaacggcctggccaaagccttgtccacc
gaccgcacgcttcctgcgcgtagtgaacgctccgcccagccatag
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