Cohnella candidum: EAV92_17255
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Entry
EAV92_17255 CDS
T05696
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
coh
Cohnella candidum
Pathway
coh00521
Streptomycin biosynthesis
coh00523
Polyketide sugar unit biosynthesis
coh00541
O-Antigen nucleotide sugar biosynthesis
coh01100
Metabolic pathways
coh01110
Biosynthesis of secondary metabolites
coh01250
Biosynthesis of nucleotide sugars
Module
coh_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
coh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EAV92_17255 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EAV92_17255 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EAV92_17255 (rfbC)
Enzymes [BR:
coh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EAV92_17255 (rfbC)
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Gene cluster
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Motif
Pfam:
dTDP_sugar_isom
DUF1411
Motif
Other DBs
NCBI-ProteinID:
AYQ74157
UniProt:
A0A3G3K278
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All DBs
Position
complement(3783948..3784505)
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AA seq
185 aa
AA seq
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MIVTEGKLPGVKLIEPKVFQDHRGFFVESYNQERYVQNGIPMVFVQDNHSLSVETGVLRG
LHYQLEPKAQTKLVRVTAGSIYDVVVDIRKGSPTFGHWEGFTLSADNKHQLLVPKGFAHG
FCTLEPNTEVQYKVDNLYSAEHDRGIAWDDPAIGITWPVEHAILSEKDTRHPKLANAEIN
FIFEG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgatagtaacggaaggcaagctgccgggtgttaagctaatcgaaccgaaggttttccaa
gatcaccgcggatttttcgtggagagctataatcaagaacgctatgtgcagaatggcatt
cctatggttttcgttcaggacaatcattctttgtccgtcgaaaccggcgtcttacgcgga
ctgcactaccagttggagccgaaggctcaaaccaaactggttcgagtgacggccggctcc
atttacgatgttgtggtggatattcggaaaggctcaccgactttcggccattgggaaggg
tttacgttatccgccgataacaagcatcagctccttgtgcctaaaggtttcgcgcatggt
ttctgcacgctggagccgaacacagaagtgcaatacaaggtggacaatctttattcggcg
gaacacgatcggggaatcgcatgggacgatcctgcgattgggatcacatggccggttgaa
cacgcgattctctcggagaaagacactcgccatcctaagctagccaatgctgaaatcaac
ttcattttcgaagggtga
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