Colwellia sp. Arc7-D: DBO93_03800
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Entry
DBO93_03800 CDS
T05422
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cola
Colwellia sp. Arc7-D
Pathway
cola00521
Streptomycin biosynthesis
cola00523
Polyketide sugar unit biosynthesis
cola00541
O-Antigen nucleotide sugar biosynthesis
cola01100
Metabolic pathways
cola01110
Biosynthesis of secondary metabolites
cola01250
Biosynthesis of nucleotide sugars
Module
cola_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DBO93_03800 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DBO93_03800 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DBO93_03800 (rfbC)
Enzymes [BR:
cola01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DBO93_03800 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
PepX_C
Ppnp
Motif
Other DBs
NCBI-ProteinID:
AWB56769
UniProt:
A0A2S0UXT5
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All DBs
Position
865949..866497
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AA seq
182 aa
AA seq
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MQYIDTAIADVKIIEPNVFGDERGFFMETFRVDEFTSQCSDRTFVQDNHSKSSHGILRGL
HYQLKNTQGKLVRVTSGEVYDVAVDMRKSSPTYGQHVGVVLSGENKRQLWVPEGFAHGFY
VMSDSAEFVYKCTDYYAPEHEVSLLWNDPALNIQWPLRDGDKPSLSAKDEVGLLFKDAPA
FK
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacattgataccgctattgcggatgttaaaataattgaaccgaatgtgtttggt
gacgaacgtggtttttttatggaaacctttcgtgttgatgaatttacttcacaatgttca
gatcgtacctttgtgcaagacaatcatagtaaatcgagtcatggcatattacgtggttta
cattatcaactgaaaaatacccaaggcaaattggttcgggttacgtctggtgaagtttat
gatgttgcggttgatatgcgtaaatcgtcacctacttatggtcaacatgtaggcgtagta
ctttctggcgaaaataaacgtcagttgtgggtgccagaaggttttgcgcatggcttttat
gtcatgagtgactcagcagagttcgtttataaatgcaccgactattatgcacccgagcat
gaagtgtcgttgttatggaacgatccagcgttaaatattcaatggccgcttcgcgatggc
gataaaccttcgttatcagcaaaagatgaagtcggtttattgtttaaagatgcacctgca
tttaaataa
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