Colwellia sp. Arc7-D: DBO93_10360
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Entry
DBO93_10360 CDS
T05422
Name
(GenBank) 23S rRNA pseudouridine(955/2504/2580) synthase RluC
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
cola
Colwellia sp. Arc7-D
Brite
KEGG Orthology (KO) [BR:
cola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cola03009
]
DBO93_10360
Enzymes [BR:
cola01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
DBO93_10360
Ribosome biogenesis [BR:
cola03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DBO93_10360
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF3603
Motif
Other DBs
NCBI-ProteinID:
AWB59515
UniProt:
A0A2S0V5M7
LinkDB
All DBs
Position
complement(2379445..2380413)
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AA seq
322 aa
AA seq
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MTDSPKPQVRFITVDSEDAGQRIDNFLVKTLKGVPKSMLYRLLRKGEIRVNKKRTKPEYK
LVDEDIIRVAPIRVSENTNTVSTQLNVVANLEKQILFEDERLIVINKPSGMAVHGGSGLS
FGLIEALRALRPDARMLELVHRLDRDTSGCLVVAKKRSALRHLHEQLRNKTVQKFYHALV
KGRWSTKLTRVSEGLKKNDLKSGERVVVVDNINGKESETRFKVLQHYKNATLVRAFPVTG
RTHQIRVHCQTKGHSIACDAKYGHEDFDLEMKKLGLKRLFLHAASIEFIHPLSNERIKIE
APLEPSLEKLLNKLTKADVHPT
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgacagatagcccaaaacctcaagttagatttattaccgtagacagtgaagatgcgggt
caacgcattgataactttttagtgaaaaccctcaagggtgtgccaaagagcatgttgtat
cgcctgttacgtaaaggtgaaatacgggttaataaaaaacgtacaaaaccagaatataaa
cttgttgatgaagatattattcgtgttgcgccaattcgtgtttctgaaaatacgaatacg
gtgtcgacacaattaaatgttgttgccaacttagaaaaacaaatattgtttgaagacgaa
cgtttaattgttattaataaaccttcaggtatggcagttcatggcggtagtggcttgagt
tttggtttaattgaagccttaagagctttaagacctgatgcccggatgcttgaattggtt
catcgccttgaccgtgatacttctggttgtttagttgtagcaaaaaaacgctcagcatta
cgacacttgcatgagcaactgagaaataaaaccgtacaaaagttttatcacgccttagta
aaggggcgctggtcaactaagttaacgcgtgtttctgaaggtttgaagaagaatgactta
aagtcaggtgagcgggttgtggtcgttgataatattaacggtaaagaatctgaaacacgc
ttcaaagtattgcaacattataaaaatgcaacgcttgtgagagcctttcctgtgaccgga
cgtacccatcaaattcgtgttcattgtcaaaccaaagggcattcaattgcctgtgatgct
aagtatggccatgaagactttgatctggaaatgaaaaaactaggtttaaaacgcttattt
ttacatgcggctagtattgagtttattcatccattaagtaatgaacggattaaaattgaa
gcacctttagagccctcgttggaaaaattgttaaataaattaaccaaagcggatgttcac
ccaacgtaa
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