Commensalibacter melissae ESL0284: GN303_08380
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Entry
GN303_08380 CDS
T06375
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
comm
Commensalibacter melissae ESL0284
Pathway
comm00521
Streptomycin biosynthesis
comm00523
Polyketide sugar unit biosynthesis
comm00541
O-Antigen nucleotide sugar biosynthesis
comm01100
Metabolic pathways
comm01110
Biosynthesis of secondary metabolites
comm01250
Biosynthesis of nucleotide sugars
Module
comm_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
comm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
GN303_08380 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GN303_08380 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GN303_08380 (rfbC)
Enzymes [BR:
comm01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
GN303_08380 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
DMP12
Motif
Other DBs
NCBI-ProteinID:
QGT69260
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Position
complement(1877159..1877719)
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AA seq
186 aa
AA seq
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MKIEKLAISEVLLITPPRFRDNRGFFSETYNAQRLKEVGIDLPFVQDNQSLSVQKGVVRG
LHCQLGPYEQGKLVRCTQGSIWDVAIDARTGSPTYGKWVAAELSADNWSQLWIPPGFLHG
FCTLTENVMVQYKCTNLYNKVSERAVLWNCKEIGIKWPIAVNDAILSEKDMQNPSFSAAK
NWFSYS
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagaaaaattagccatttcagaagtattattgataacacctcctcgctttcgg
gataatcgtggatttttttcagaaacctataatgcgcagcgattaaaagaagtcgggatt
gatttgccttttgtgcaggataatcaaagcctttctgttcagaaaggtgttgtgaggggt
ttgcattgtcagttgggcccttatgaacaagggaagttggtaagatgtacgcaaggttcg
atttgggatgtggctattgatgcgcgaacgggttctccgacatatgggaaatgggttgct
gcggaattatcagctgacaattggtctcaattgtggataccaccaggatttttacatggt
ttttgtacgttaacagaaaacgttatggtacaatataaatgtacaaatttatataataaa
gtcagtgagcgtgctgttttatggaattgtaaagaaattggcattaaatggccaatcgct
gtaaatgatgcgattttatcagaaaaagatatgcaaaatccatcattttcagcagcaaag
aattggttttcatattcataa
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