Cellulophaga omnivescoria: PBN93_03270
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Entry
PBN93_03270 CDS
T08738
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
comn
Cellulophaga omnivescoria
Pathway
comn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PBN93_03270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
comn03019
]
PBN93_03270
03016 Transfer RNA biogenesis [BR:
comn03016
]
PBN93_03270
Enzymes [BR:
comn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PBN93_03270
Messenger RNA biogenesis [BR:
comn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PBN93_03270
Transfer RNA biogenesis [BR:
comn03016
]
Prokaryotic type
tRNA degradation factors
PBN93_03270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
Motif
Other DBs
NCBI-ProteinID:
WBU90045
LinkDB
All DBs
Position
738963..741206
Genome browser
AA seq
747 aa
AA seq
DB search
MIPKVFKEVIDLGDGREISIETGKLAKQAHGSVVVQSGNCMLLCTLVSNYKQSDVDFLPL
TVDYREKFASAGRYPGGFFKREARPSDGEVLTMRLVDRVLRPLFPKDYHAETQVMIQLMS
HDENVMPDAMAGLAASAAIQLSDVPFETPISEARVGRINGEFIINPTRAQLEESDIDMMI
GASADSVMMVEGEMLEISEEEMAEAIKFAHEAIKVQCAAQVKLAEAFGKKETREYEPERE
DEDLAKKIYDMAYDKVYAVAKAGSSKHERSTAFSEIKEDIKTTFSEEELADYGDLISKYY
AKAEKTAIRNLTLDEGLRLDGRKTDEIRPIWCEVDYLPSTHGSSIFTRGETQALATVTLG
TSREANQIDMPSYEGEERFYLHYNFPPFSTGEARPLRGTSRREVGHGNLAQRALKNMVPA
DCPYTVRVVSEVLESNGSSSMATVCAGTMALMDAGVQLKKPVSGIAMGLISDAETGKYAV
LSDILGDEDHLGDMDFKVTGTADGITACQMDIKVKGLSYEILVNALKQAREGRLHILGKL
TDTISEPASDVKAHSPKMITRRIPNEFIGALIGPGGKVIQELQKETGTTIVINEDPETEE
GIVEILGTGQDGINAVLAKIDSLLFKPEKGSVYEVKVIKMLDFGAVVEYTEAPGNEVLLH
VSELAWERTENVTDVVNMGDVFDVKYFGVDPRTRKEKVSRKALLPKPEGYVERAPRENKG
RDNKGRDNRGRDNRRDDRKPRENKKED
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgattccaaaagtatttaaagaggtcatagaccttggggacggtagagaaatctctatt
gaaaccggaaaattagcaaaacaggctcacggttctgttgttgttcaatctggaaattgt
atgttactgtgtacgttagtttctaactacaaacaaagtgatgtagattttcttccatta
acggtagattaccgtgaaaaatttgcttcggcaggtcgttatcctggtggattctttaaa
agagaagcaagaccaagtgatggtgaagtattaactatgcgtttagtagaccgtgtttta
cgtccacttttcccaaaagattaccacgccgaaactcaagttatgattcagttaatgtct
catgatgaaaatgtaatgccagatgctatggctggtttagcagcatctgcagcaatacaa
ttatctgatgtaccttttgaaactcctatctctgaagctagagttggacgtataaatggt
gaattcataattaaccctaccagagctcaattagaagaatctgacattgatatgatgatt
ggtgcttctgcagactctgtaatgatggttgagggtgaaatgcttgaaatttctgaagaa
gaaatggctgaggcaataaaatttgctcatgaagctataaaagtacaatgtgctgctcaa
gtaaaattagcagaagcttttggtaaaaaagaaacacgtgagtacgagccagaaagagaa
gatgaagacttagctaagaaaatttatgatatggcatatgataaagtatatgctgtagct
aaagcaggttcttctaaacatgaaagaagcactgctttttctgaaattaaagaagatata
aaaactactttttctgaggaagaattagcagattacggagatttaatttctaaatattac
gcaaaagcagaaaaaactgcaatacgtaacttaactttagatgaaggtttacgtttagat
ggtcgtaagactgatgaaattagaccaatttggtgtgaagtagattacctaccatctaca
cacggttcttctatttttacacgtggagaaactcaagcattagcaacagttactttgggt
acttctagggaagctaaccaaattgatatgccatcttatgaaggtgaagaacgtttttat
ttacactacaacttccctcctttctcaactggtgaagcacgtcctttaagaggtacttct
cgtcgtgaggttggtcatggtaacttagcacaacgtgctttaaaaaatatggttcctgca
gattgtccttacactgtacgtgtagtatctgaagttttagaatctaacggttcttcttct
atggcaactgtttgtgctggtacaatggcattaatggatgctggtgtacaacttaaaaaa
ccagtttctggtattgctatgggattaatttctgatgcagaaacaggtaaatacgctgta
ttatcagatattttaggtgatgaagatcacttaggagatatggactttaaagttactggt
actgcagatggtattactgcttgccaaatggatattaaagtaaaaggtctttcttatgaa
attcttgtaaatgctttaaaacaagctcgtgaaggacgtttacacattttaggtaaatta
acagacacaatttctgagccagctagtgatgttaaagctcactcaccaaaaatgattacc
agaagaattcctaacgaatttattggtgcattaattggtccaggtggtaaagttattcaa
gaacttcaaaaagagacaggaactactattgttataaatgaagatcctgaaactgaagaa
ggtattgtagaaattttaggcacaggacaagacggcataaatgctgtattagctaaaata
gattctcttttatttaaaccagaaaaaggtagtgtttacgaggtaaaagtaattaaaatg
ttagattttggtgctgttgtagaatatacagaggctccaggaaatgaagttttattacac
gtatctgaattagcatgggaacgtacagaaaatgtaaccgatgttgtaaatatgggagac
gtttttgatgttaaatattttggagtagacccaagaacacgtaaagaaaaagtatctaga
aaagctttattacctaaaccagaaggttatgtagaaagagctcctagagaaaataaagga
cgtgataataaaggcagagataatcgtgggcgtgacaatcgtcgtgatgatcgtaaacca
agagaaaacaaaaaagaagattaa
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