Cellulophaga omnivescoria: PBN93_12330
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Entry
PBN93_12330 CDS
T08738
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
comn
Cellulophaga omnivescoria
Pathway
comn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
comn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PBN93_12330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
comn03021
]
PBN93_12330
Transcription machinery [BR:
comn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PBN93_12330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
HTH_40
GerE
HTH_5
Sigma70_r2
HTH_Tnp_ISL3
Sigma70_ECF
HTH_11
HTH_10
HTH_DeoR
TrmB
BibA_N
HTH_24
Phage_CP76
HTH_30
HTH_23
DUF2089
HTH_7
Sigma54_DBD
HTH_20
MarR_2
HTH_29
HTH_17
Focal_AT
Motif
Other DBs
NCBI-ProteinID:
WBU88654
LinkDB
All DBs
Position
complement(2785457..2785969)
Genome browser
AA seq
170 aa
AA seq
DB search
MKTSQEFEDIYSKHWEKLYAFSFKVTKDSNLSKNIIQDVFTNLWERKNSLNINSVEHFLF
RAVKNQILKHYNQNTFNTTSIDNEFDNFIMESPSISESDLSKTVFHIVDKLPAKRKEIFL
MNKLQEMNVEQIAEELKLSKQTVKNQLSSAIKQLRLELKQLSWLLFPFFF
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacctcccaagaatttgaagatatctattctaaacactgggaaaaattatatgct
ttttcatttaaagttacaaaagacagcaacttatctaaaaacattatacaagacgtattt
accaatttatgggagcgtaaaaatagcttaaacataaactctgttgagcattttttattt
agagcagtaaaaaatcaaattttaaagcattacaatcaaaacacttttaacactacttct
atagataatgagtttgataattttattatggaatctccatctatttctgaatctgaccta
tctaaaaccgtttttcatattgtagataagttacctgctaagcgaaaagaaattttttta
atgaacaagctacaggaaatgaatgtagaacaaattgcagaggagctaaagctatcaaaa
caaacggttaaaaatcaattatcatctgcaattaaacagcttagactagagcttaaacaa
cttagttggttactatttccgttctttttttaa
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integrated database retrieval system
