Candida orthopsilosis: CORT_0A10510
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Entry
CORT_0A10510 CDS
T02488
Name
(RefSeq) Lig4 DNA ligase
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
cot
Candida orthopsilosis
Pathway
cot03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
CORT_0A10510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0A10510
Enzymes [BR:
cot01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
CORT_0A10510
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
CORT_0A10510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT_2
RNA_ligase
BRCT
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
14537494
NCBI-ProteinID:
XP_003866875
UniProt:
H8WXD1
LinkDB
All DBs
Position
1:complement(2296171..2298996)
Genome browser
AA seq
941 aa
AA seq
DB search
MSCLLDNVQPPPPNNIEPTLTLLTNELFDKLDAVKRHNLQEASTITERRAQIINDFISTF
RTHIGNDMLQSANLIFPEKTSRLYVIKEVVLARLIIKMYKISKDTEEYNLLHYWNRQYQK
SKRFAVDERKIRDLPLQSARIIATRRPFVERCKEYNVPQINSILDDLTMAKQSQEHLEIL
QPLFDNLRIEEIRWLIHFILKKPILIHMEKYFFNSWHPDGYRLYSICNNLETTFNLLSDP
NRRLAREYLGIQPRYKFKPQLAVKLNSNYNAVVRKLQKKQPMGPQYEQKFTQLELEDKFY
IEEKMDGDRMLLHKEGNRFKFFSRRLKDYSFLYGESFQFGSLTKYIRDAFANNIDSIVLD
GEMVAYDYKRQAILPFGTLKSSAIQESVRQFTTIDHYEQQTSYPYYLIFDILYLNGRDLS
NYPLFFRKNLLERIIKPVPNRFEVLDARLGSSVVDVEKAVREVVTKRSEGLVLKHTQSRY
VIDGFRNPNWIKVKPDYLEKFGENLDLVVIGKNPGVKNSYMMGLINKQEGSEYYGSYYSF
CMCANGFGIEEFDKIERLTHGRWINTAQKMPPEQLIKFGRKKPDFWIDPKYSLVLEIRAR
SIDVRPEATFAVGTTLHNMHCRRIREDKSIGECISMQEYFELKQNYMQDLNLKPQATTIK
KKELTKLTSFNEPSNLKKVKIESDLFASFEFLILSDKRDPHGEIITIEELKTLVKRFGGH
LINSIDAETYLQIIIITEKSLPTSQRYLSQGLDLVKPSWIFECIKRNHILQLEPCFIFDS
QNWPMYDQRVGTYGDSYTVHLPLDQINAPNLTREEVNEFRQQFEWDGAIKPILYLFAGIT
FHVIGTSLAGQLVKNRIERFSGEVVDDFVNCGYIVVPSYEEEELRQQTIATLKKIYEQIN
RNLRISNGKFRSKIPFSVTENFIHESIRSNSVADPEDYKFY
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtttgctcgacaatgttcaacctccaccaccaaacaacatagaaccaactctc
acacttcttaccaatgaattatttgataaacttgatgcagtgaaacgtcataatttacaa
gaagcttcaaccataactgaacgtagagcacaaattatcaatgatttcatttctactttc
cggactcatattggtaatgatatgcttcagtcagctaatctaatattccctgaaaagacc
agcagattatatgtcataaaagaggtggtattagctcgacttattatcaaaatgtacaag
atctccaaagacactgaagaatataatttacttcattattggaaccgacaatatcaaaaa
tctaaacgatttgcagttgatgaacggaaaattagagatttaccgttgcaatctgcaaga
ataattgctacacggcgaccatttgttgaacgttgtaaagagtataatgttcctcaaatc
aattccatattggatgatttaacaatggctaaacaatcacaagaacatttagaaatttta
caaccattatttgataatttaagaattgaagagattcgttggttgattcactttatattg
aagaaaccaattttgattcatatggagaagtattttttcaatagttggcaccctgatggg
tatagattatacagcatttgtaataatttggaaacgacatttaacttgttgagtgaccca
aacaggagattagctagagaatatttaggaattcaacctagatacaagttcaaaccacaa
ttggcggtgaaattaaattcaaattacaatgctgttgttcgtaaattacaaaagaaacaa
ccaatgggtccacaatatgaacaaaagttcactcagttggaattggaggataagttttac
attgaagaaaagatggatggtgatcgaatgttgttgcataaggagggcaaccgattcaaa
tttttttcaagacgtttaaaagattattcatttttatatggtgaatcgtttcaatttgga
tccttaactaagtatatacgagatgcatttgccaataatattgattcaatcgttcttgat
ggggaaatggtggcttatgactacaaaagacaagcaatattaccatttggtaccttgaaa
tcactggcgattcaagaaagtgtacgtcaatttacaaccattgatcattatgaacagcaa
acaagttatccttactatctaatatttgatatcttgtacttaaatggccgtgatttgagt
aattacccgttattttttcgaaaaaatttattggaacgaatcattaaacctgtgccaaat
agatttgaagttcttgatgctagattaggttccagtgttgtggatgttgaaaaagccgta
cgtgaagttgttactaagcgaagtgaaggtttagtcttaaaacacactcaactgagatat
gtaatcgatgggtttagaaatcccaattggattaaagtgaaaccggattatttagagaag
tttggtgaaaatttagatttagtagttattggcaagaacccgggtgtaaaaaattcgtac
atgatgggattaattaataaacaagaaggtagtgaatactatggatcttattatagtttc
tgcatgtgtgccaatggatttggaattgaagaatttgacaagatcgaacgattaacccat
ggtcgatggatcaatacagcacaaaaaatgccacccgagcagttgataaaatttggtcgc
aaaaagccggatttttggattgatccgaaatactcattagttttagaaattcgagctcga
tcaattgatgtacgaccagaagctacatttgccgtggggacaacattacacaatatgcat
tgtcgtcgtatacgtgaagataaatcaattggtgaatgtatttcaatgcaagaatatttt
gaattaaaacagaattatatgcaagatttaaatttgaaaccacaagctactacaataaag
aagaaagaattgactaaattgacctcgtttaatgaaccactgaatttgaaaaaagttaaa
atagaactggatttatttgcaagttttgagtttttaatcttgagtgataaacgtgatccc
catggggaaattattaccattgaagaattaaaaactttagttaaacggtttggaggtcat
ttaatcaattcaattgatgcagagacttatttacaaattataatcattactgaaaagagc
ctacctacaagccaacgatacctatcccaaggtttagatttagttaaaccatcgtggatt
ttcgaatgtatcaaacgaaaccacattttgcagctagaaccttgtttcatatttgattct
cagaattggccaatgtatgatcaacgagttggcacatatggtgattcgtatacggttcat
ttaccacttgatcaaatcaatgctcccaatttaactcgtgaagaagtgaatgaatttcga
caacaatttgaatgggatggtgcaattaaacccatattgtatttatttgcggggataact
ttccacgtaattggtacatctttagctggtcaattggttaaaaaccgtattgaacgattt
agtggtgaggttgttgatgattttgtaaattgtggatatatcgtggttcctagttatgaa
gaagaagagttacgacaacaaactattgcaacattgaaaaagatttatgagcagattaat
cgaaatctacgaattagtaacggaaaatttagaagtaagattccattctctgtcacggag
aattttattcatgaatctattagatccaatagcgttgctgatcccgaagattacaaattt
tattaa
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