Candida orthopsilosis: CORT_0C07310
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Entry
CORT_0C07310 CDS
T02488
Name
(RefSeq) Sgs1 RecQ-related DNA helicase
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
cot
Candida orthopsilosis
Pathway
cot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CORT_0C07310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cot03032
]
CORT_0C07310
03400 DNA repair and recombination proteins [BR:
cot03400
]
CORT_0C07310
Enzymes [BR:
cot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CORT_0C07310
DNA replication proteins [BR:
cot03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
CORT_0C07310
DNA repair and recombination proteins [BR:
cot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
CORT_0C07310
Bloom's syndrome complex (BTR)
CORT_0C07310
FA (Fanconi anemia) pathway
CORT_0C07310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
14539653
NCBI-ProteinID:
XP_003871523
UniProt:
H8X4E9
LinkDB
All DBs
Position
3:1637918..1641124
Genome browser
AA seq
1068 aa
AA seq
DB search
MIKTNNLKEQLEWLNQANPNLPCPQIIAAALKKYPKDKTGNASQSTRQTSNSHQQRLNSN
SNQFDSLRGDVSVIGDFVVTTISPESDKENVPPPVPRSQHNSFHDSSFNSSFNASSTSVI
SQSLTQSRGGASRSRKTQSKLPLVSKFFKPSNDSSVHTTQYTQTHNRSQSSPDNVIDLTL
DNDSPRKRPAQDELPVSNKRAKPDNIQLYLELIQLQESKIKLLEEKFLISESTSISLDQK
KEHYVEFQAKTETLDDLIANLKDVAKEVEAAPPTTQNEVTEDIEDTTSDAHVFRAPARPT
RIAEAREIVSNIDVVNDNSILDIEDDFGNNTMEGLRTPTQERDEVDDLGSFIDDASIPNS
PSVDGFSDDGSDAVLIESQEIHNLRLSPDVAEKYGINYDDRPVSPSPINENNDDLEWSNE
DPDNDHIEDIEFSTQLNQEREIDVIELDSDSDDDIELAENTALSEMPLPARNMIGSSDSA
ASNINAISASVVANQNGPPLINMDSEDDFSDEDDEIMQIINAPKPASRIVPEGSEDFIDE
VYDTLNKVFKLQSFRPNQLEAVIASLLNKDVFVLMPTGGGKSLCYQLPALIKGGHSKGTT
VVISPLISLMQDQVQHLIHKNIKAGMISSKANSDDNKHTLNLFREGFLDIVYLSPEKANK
STMIQKIIGKLYDRNQLARVVIDEAHCLSSWGHDFRPDYKGMGFFKERFPAVPIMALTAT
ANEKVRMDIVHHLKMNSPVYLKQSFNRTNLYYEIRWKSGNYLESMKDYILSRYKNKCGII
YCHSKQSCEQTSAKLNSFGLKTSFYHAGMTPEDRFKIQTNWQKNKIQLICATIAFGMGID
KPDVRFVIHLFIPRSLEGYYQETGRAGRDGKPSECIMYYCYKDARSLQNMIHRDADLTEE
GKENHLAKLRQVVQYCENTTDCRRKQVLHYFNETFNPINCKKQCDNCKNYNHVTVVEKDC
TQYAQDILKLVKSIQNEKVTVLHCQDVFKGLKYNKITKMGHNNNPYHAKGKNLDKTDVER
IFFYLLSEECLVEYQVMKGGFASNYVRVGRNASKVLNGNKTIKIQFSS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaacaaacaacctcaaagaacagcttgaatggctaaatcaagcaaatcctaat
ctaccgtgtcctcagattattgctgcagcactcaaaaagtacccaaaagacaaaactggc
aacgcatcacaatcaacgcgtcagacatccaatagtcatcaacaacgacttaactcgaat
agtaatcagtttgattcattgcggggagacgtctccgttattggcgactttgttgtcact
actatatcacccgaaagcgacaaagaaaatgtcccaccaccagtaccgagaagccaacac
aactcctttcatgattcttcattcaactcatcattcaacgcgtcttctacatcagtaata
ctgcaatcacttacgcaaagcagaggaggggcaagcagatctagaaaaacacagtcgaaa
ctaccgttggtgtcaaagtttttcaagccactgaatgactcatctgtgcacacgacccaa
tatacacagacacacaatagaagccaatccagccctgataatgtaatagacttgacgctt
gacaatgactctccaaggaaacgaccggcacaggatgaactacctgtgtcgaacaaaaga
gcaaagcctgataacatccaactctaccttgaattgatacagttacaagagtccaagatc
aaactactagaggagaaatttttaattagtgaatccacatccatctcattggatcagaaa
aaagaacactatgtggaatttcaggcgaaaactgaaacgttggatgatttgattgcaaac
ttgaaagacgtggctaaggaggttgaagctgcaccaccaacaactcagaatgaagtcact
gaagacatagaggataccactagtgacgcacatgtgtttagagcacctgcaagaccaaca
agaattgcagaggcaagagagattgtgtcaaatatcgatgttgtcaacgacaatctgatt
ttagatatagaggatgatttcggtaacaataccatggaaggattaagaacaccaacacag
gagcgggatgaggtcgacgacttgggtagctttatagatgacgcttcaataccgaactcc
ccttccgttgatgggttttcagatgatggctccgacgcggtgttgattgaaagtcaagag
atacataatcttaggttgtcgccagatgttgcagagaaatatggaattaattacgatgat
aggcctgtgtctccaagtccaataaatgagaacaatgacgatctagagtggctgaatgag
gacccagataatgaccatatcgaggatattgagttttctactcaactcaaccaagaacgt
gagattgacgtcattgagctcgattcagattcagatgatgatatcgagttggctgaaaat
accgctcttagtgaaatgccactacctgcgcgcaacatgattggctcgtcagattcagca
gcgtcaaacataaatgcgatttccgcatccgttgttgccaatcaaaatggacccccatta
ataaatatggatagtgaggatgactttagcgatgaagatgacgaaatcatgcaaatcatc
aatgcaccaaaaccagcatcgcggatagtgccagagggttctgaagactttattgatgaa
gtgtatgacacactcaataaagtgtttaagctacaatcatttcgtccgaatcagttggaa
gctgttattgcatcccttttgaataaggatgtgtttgtcttgatgcctactggagggggg
aagtctctttgttatcaacttccggcgttaatcaaaggtggccatagtaaaggcacgacg
gttgttatttccccgttgatatcacttatgcaagatcaagtgcaacatctaattcacaaa
aacatcaaagccggaatgattagctcaaaggccaatagtgacgacaataaacatacacta
aacctttttcgtgaaggttttctcgatattgtatacttgtcaccagaaaaagccaacaaa
tcaacaatgattcaaaaaattatcggcaagctatacgatcgcaatcaactagcacgtgtt
gtaattgacgaagcacattgtttgagttcgtggggtcatgattttcgtccagattataaa
ggcatgggcttttttaaggaaaggtttcctgcagtgccaatcatggcattgacggccacc
gctaatgaaaaagtgcggatggatattgtgcatcacttgaaaatgaattcacctgtgtat
cttaaacaaagtttcaacagaaccaatttgtattacgaaataagatggaagagtggcaac
tacctcgaatcaatgaaggactatatcttatcacggtacaagaacaaatgtgggatcatc
tattgccactctaagcagtcttgtgagcagaccagtgccaagttgaatctgtttggattg
aaaacttcgttctaccacgcaggaatgacaccagaggaccgtttcaagatccaaacgaat
tggcaaaagaacaagattcagttgatttgtgcaactatagcatttggtatgggtattgat
aaaccagatgtgaggtttgttatacacttatttattcctagaagtttagagggttactat
caagagacaggaagagcaggacgtgatggcaagccatctgaatgtatcatgtactattgc
tacaaagatgcaaggtcattgcaaaatatgattcatcgtgatgctgatttgactgaagaa
ggtaaggagaaccatttggcgaaattgagacaagttgtccagtattgtgaaaacaccact
gattgcagaaggaagcaagtgttgcactacttcaatgagaccttcaacccaatcaattgc
aagaaacagtgtgacaattgcaaaaactacaaccatgtaactgttgttgaaaaggattgt
acacaatatgctcaggacattctcaaactcgtcaaatcgattcaaaatgaaaaggtgact
gttttacactgtcaggatgtattcaaaggtctcaagtacaacaaaattactaaaatgggt
cacaacaataatccttatcacgcaaaaggcaaaaacttggacaaaactgatgttgagaga
attttcttttacttgcttagtgaggagtgtcttgttgaataccaggtgatgaaaggcggc
ttcgcttcaaactatgtcagggttgggagaaacgcatcaaaggtgttgaatggaaacaaa
actattaaaattcaatttagctcttag
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