Corynebacterium pseudotuberculosis Cp162: CP162_01300
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Entry
CP162_01300 CDS
T02154
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K23987
dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:
5.1.3.13
1.1.1.133
]
Organism
cou
Corynebacterium pseudotuberculosis Cp162
Pathway
cou00521
Streptomycin biosynthesis
cou00523
Polyketide sugar unit biosynthesis
cou00541
O-Antigen nucleotide sugar biosynthesis
cou01100
Metabolic pathways
cou01110
Biosynthesis of secondary metabolites
cou01250
Biosynthesis of nucleotide sugars
Module
cou_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cou00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CP162_01300 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CP162_01300 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CP162_01300 (rfbD)
Enzymes [BR:
cou01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
CP162_01300 (rfbD)
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
CP162_01300 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
dTDP_sugar_isom
Epimerase
GDP_Man_Dehyd
Polysacc_synt_2
NAD_binding_4
AP_endonuc_2
DHquinase_II
Motif
Other DBs
NCBI-ProteinID:
AFM06602
LinkDB
All DBs
Position
complement(264117..265499)
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AA seq
460 aa
AA seq
DB search
MNIETCPIQGMMVIHLDLHEDSRGWFKENWQEAKLAGLGFTGFRPVQNNISFNAEAGVTR
GLHAEPWDKYVSVATGSVFGAWCDLREGSATFGATFTITITPETAVFVPRGVANGFQALE
ATAYTYLVNDHWAPDAHYSFVNLADPALNISWPIPLDQATLSKKDTTHPPLASAVPVPPK
KVLVTGANGQLGRALKKVFPHAEFCSRTDLDITTDITEARRWADYSVIINAAAYTAVDAA
ETDSTAAWRTNAEAPARLAAIAARYGITLVHLSSDYVFDGEFPVHSEQEPFSPLNVYGQS
KAAGDTAVSVAPQHYVVRTSWVVGEGNNFVSTMLSLAARGISPRVVNDQLGRLTFTEDLA
AGIRFLLDNHAPYGVYNLSNSGEIVSWAQLAQRVFTLAGRSASDVQPVSTTEYFAGKAPA
APRPRHSALDLGKITGLGFTPRDWQDALASYCTTLDAKEG
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacatagaaacctgccctatccagggcatgatggtcatccatctcgacttgcatgag
gactctcgcggctggttcaaagaaaattggcaagaggccaagcttgccggcttaggattt
accggtttccgaccagtgcaaaacaatatttcctttaatgctgaggccggagtaacccgc
ggtttacacgcagaaccatgggataaatacgtctccgtagcaaccggctcggtctttggc
gcctggtgcgatttacgcgaagggtccgcaacgtttggcgccacatttaccatcaccatt
acccctgagaccgctgtctttgttccgcggggggtggccaacggattccaggctcttgaa
gctaccgcatacacctatttagtcaacgaccactgggcaccagacgctcattattctttt
gtcaatcttgctgatcctgcattaaacatttcttggccgatccccctcgatcaagcgacc
ctttccaagaaagacacgacgcaccctccgctagcatcagcggtacccgtaccacccaag
aaagtactggttaccggggcaaacgggcagcttggcagggctctaaaaaaggtcttcccc
catgccgagttctgctctcgcaccgacttagacatcactacagacattacagaggcgcgt
cgctgggctgactacagcgtaattatcaacgccgcggcctacacagctgtcgacgccgct
gaaactgattcaactgctgcttggcgtaccaacgcggaagctcctgctcgccttgccgcg
attgctgctcgatacgggatcacactggtgcatctctctagcgactatgtctttgacggc
gaattccctgttcacagtgaacaagaacccttcagcccgctgaacgtctatgggcagtcg
aaagctgctggcgatactgctgtaagcgttgccccacagcattatgtagtgcgcaccagc
tgggtggtgggcgaagggaataactttgtatccacgatgctctcccttgccgcacgcggg
atctctccccgggtggtaaacgatcagctaggcaggctcacctttactgaggacctggcc
gcaggtatccgatttttgctcgataaccatgccccttatggggtgtataacctcagcaat
tctggggagattgtgtcctgggcgcaactagcacaacgggtatttacgctggcggggcgt
tcggcttccgacgttcaaccagtaagcacaaccgagtattttgcaggaaaagcacccgct
gccccgcgtccccgccactcagccttggacttgggtaaaatcacgggactcggattcacc
ccacgtgattggcaggatgcactcgcgagctactgcaccacactggatgcaaaggaaggc
taa
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