Colwellia sp. Arc7-635: EKO29_16475
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Entry
EKO29_16475 CDS
T06022
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov00521
Streptomycin biosynthesis
cov00523
Polyketide sugar unit biosynthesis
cov00541
O-Antigen nucleotide sugar biosynthesis
cov01100
Metabolic pathways
cov01110
Biosynthesis of secondary metabolites
cov01250
Biosynthesis of nucleotide sugars
Module
cov_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EKO29_16475 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EKO29_16475 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EKO29_16475 (rfbC)
Enzymes [BR:
cov01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EKO29_16475 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
PepX_C
Motif
Other DBs
NCBI-ProteinID:
AZQ85438
UniProt:
A0A3Q9GD00
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All DBs
Position
complement(3838881..3839426)
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AA seq
181 aa
AA seq
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MRYIDTAIADVKIIEPNVFGDERGFFMETFRVDEFTKHCSERRFVQDNHSKSSHGILRGL
HYQLKNTQGKLVRVTSGEVYDVAVDMRKSSPTYGQHVGVVLSGENKRQLWVPEGFAHGFY
VMSETAEFVYKCTDYYAPEHEVSLLWNDPALNIQWPLVDGKMPSLSAKDEVGLLFKDAPT
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatatagatactgctatagcggatgttaagataattgagcctaatgtatttggt
gatgaacgtggttttttcatggaaacttttcgggttgatgagtttactaagcattgttca
gagcgccgctttgtacaagacaatcacagcaaatcaagtcatggtattttgcgtggattg
cattatcaattgaaaaatacccaaggtaaattggttcgtgtaacttctggcgaagtttac
gatgtggcagttgatatgcgtaaatcatcacctacttatggccagcatgttggtgtggtg
ctttcaggtgaaaataaacgtcaactatgggtacctgaaggatttgctcatggtttttat
gttatgagtgaaactgcagagtttgtgtataaatgcacagattattatgcgccagagcat
gaagtgtctctgttatggaatgatccagcgttaaatattcagtggcctttagttgacgga
aaaatgccttcattgtcagcaaaagatgaagtaggtttgttatttaaagatgcgcccact
ttctaa
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