Chitinophaga oryzae: HF329_03950
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Entry
HF329_03950 CDS
T07451
Name
(GenBank) TonB-dependent receptor
Organism
coy
Chitinophaga oryzae
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Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec
CarboxypepD_reg
Big_1
CooC_C
FecR_C
STN
Motif
Other DBs
NCBI-ProteinID:
QJB30498
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Position
944472..948017
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AA seq
1181 aa
AA seq
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MKRGLRVALLPSLALYFLFQSVAAPALAAGSNRTVPLHPGNMDQPDESSLKDVLHLIEER
FNVSIAYKSNLVKSKRVQLSVTSCQTPEEALHKALAPFNLHFEKLREHFYMITEKPAATA
PAASSAPVQQRPVKGTVKDEKGNPIAGVTVKVPGTSIGTVTNADGVYSISVPGRSDDQLE
VTFIGFESQRVAVGDRQLVNFVLKEGASALNEIVVTGYTTQKKKDLTGAVAVVNIEQLNR
QPTAQVTEQLQGQASGVTVIGSGQPGEAPQIRIRGINTFGSNSPLYVVDGVPTTDIADLN
PNDVASLQVLKDAGAASIYGARASNGVIVITTRRGSGKISVHYDGYYGRQYPKKGNVWNT
LNPTEQAQLRWMAYTNSGLNPHTPQYGNGNAPVIPDYITPDGGMEGDPDTDPSKYYVNPN
FTDQNDYNNFHRIVRANKAGTDWYHEVFRPAPITSHNVAVSGGGDRGNYLFSLNYFNQQG
TLLNTYLKRYTIRSNTQYNITDHIRVGENLAFSMTENPAVEINSSDAAIGHAMREQSIIP
VYDIMGNFAGSWGDALGDAQNPVAMQARTRNNKGLNTRLFGNIYGEVDFLKYLTFRTSFG
GEIYSGWSHSFTYPQYENKENNTSNSYSEGSNNGHSWTWTNTLTYHQRFNNTHDLKILAG
TEAFDSRSRSVGGTTKDYFTFDPNFPDLSTGTGTQTNYSSRAQEGLYSLLGRVDYSFRDK
YLVSATIRRDGSSKFINNRFGWFPAITAGWRLSEEAFMKQLTWITDLKIRGGWGIMGNQL
NLSVNNGYFLYGGKRSATYYDLAGTNNGLNAGFAGMQIGNPDAKWESDVNANIGLDASLF
KGELDFSFDYYRKDIKDLLYDPELPGLAGTAAQPFVNIAQMKNHGFDFSVGWHKQFSKKL
KLNVTGTLTTYKNEIMKIADGVDYFDGDSRRFDGSNIIRNAVGQPVSSFFGYQIDGFWNS
AKEVTDADDKVKKATNDPEAFYQEGAGMGRFRYKDVNGDGRITPDDRTFLGNPNPDFTYG
INIGINYQHFDFNIFLFGTHGNQIWNNVRWWRDFYSSFESAKSKTALYDSWRPDHQNAKA
PIQEVDGSVSTQGVPNSYMVENGAYLRAKNVTLGYTLPAGSLSRLHVQKFRVYVQAANLF
TITKYSGIDPEIGGSNITDFGVDEGAYPNQRQFLIGVNLAF
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaggtttacgtgtggcgctactgccctctttagccctgtatttcctgtttcaa
tcggttgcggccccggctctggccgcaggaagcaaccggacggtccccctgcatcccggg
aacatggaccaacccgacgaatcttccctgaaagatgtgctgcacctgatagaagaacgt
tttaatgtatctatcgcttacaaaagcaacctggtaaaaagtaaacgggtacaactgtcc
gtcaccagctgccagacaccggaagaagcgctgcataaagcactggcgccatttaacctg
catttcgaaaagctgagggaacacttttacatgatcaccgaaaagccggcggccaccgca
cccgccgcctcctcagcccctgtgcagcagcgcccggtgaaaggcacggtgaaagatgaa
aagggaaaccccatcgccggcgttaccgtaaaagtacccggcaccagcatcggcaccgtc
accaacgctgacggcgtctattccatttccgtccccggcaggagcgacgatcagctggaa
gtgactttcatcggctttgagtcacagcgtgtagccgtcggcgataggcagctggtgaac
ttcgtcctcaaagaaggcgccagcgcgctcaatgaaattgtggtcaccggctacaccacc
cagaagaaaaaagacctcaccggcgcggtagcagtggtcaacatcgaacaactgaaccgc
cagcccaccgcacaggtaacagaacagctgcagggacaggcctccggggtaacggtcatc
ggctccggtcaaccaggggaagcaccccagatccggatccgcggtatcaacaccttcggc
tccaactccccgctgtatgtggtagacggcgttcctacgacagacatcgccgacctcaac
cccaacgatgtggccagcctgcaggtactgaaagatgcaggcgccgcctccatctacggc
gcccgggcttccaacggcgtgatcgtcatcaccacccgcagaggctccggtaaaatatct
gtccactacgacggatactacggccgccaatacccgaaaaaaggcaacgtctggaacacc
ctcaatcccaccgaacaggctcagctccgctggatggcctacaccaactccggccttaat
ccgcatacccctcaatatggtaacggcaacgcaccggtcatcccggactatatcacgccc
gacggcggcatggaaggagatcccgacaccgacccctccaaatattatgtgaatcccaac
tttactgatcaaaacgattataacaactttcaccgtattgtacgtgccaacaaggccggg
actgactggtatcacgaagtcttccgcccggcccccatcaccagccacaacgtcgcggta
agcggtggcggggatcgcggcaattacctcttttccctcaattattttaatcaacagggt
acgctgctgaacacctatctgaaaagatatacgatccgctccaatacccagtacaacatc
actgatcacatcagagtgggggaaaatctcgctttttcgatgacggaaaaccctgctgtg
gaaattaacagctccgacgcggccatcggccacgccatgcgcgaacaaagcatcataccg
gtgtacgacattatgggcaattttgctggctcctggggcgatgccctcggagacgcccag
aacccggtagcaatgcaggctcgcaccagaaacaacaaaggccttaacacccgtttgttt
ggtaacatctacggagaagtggacttcctgaaatacctcaccttccgcaccagcttcggt
ggtgagatctattccgggtggtcccactccttcacctacccgcagtacgagaacaaagag
aacaacacctccaactcctactcggaaggctccaacaacggtcacagctggacctggacc
aatacgctcacctatcatcagcgcttcaacaatacccacgacctgaaaatactggccggc
acggaagcattcgacagccgtagccgctccgttggcgggaccaccaaagactactttacg
ttcgatcccaacttcccggacctcagcaccggtaccggcacgcaaaccaactacagcagc
cgcgcacaggaagggctctactcgctcctcggcagggtagactactccttccgcgataaa
tacctcgtcagcgctaccatacgccgcgacggttcctccaaattcatcaacaaccgcttc
ggctggttcccggcaataaccgccggctggcgcctctccgaagaagccttcatgaaacag
ctcacctggatcaccgacctcaaaatccgcggcggctggggtatcatgggcaaccagctc
aatctcagcgtcaacaacggttacttcctctacggcggcaaacgcagcgccacctactac
gatctcgcaggcaccaacaacggccttaacgcgggtttcgcaggtatgcagatcggcaac
cccgacgctaaatgggagagcgatgtcaacgccaacatcggcctggacgcttccctgttc
aaaggtgaactggacttctcgttcgactactaccgcaaggatatcaaagacctgctctac
gatcccgaactgccaggcctcgccggcaccgccgcacagccctttgtcaacatcgcgcag
atgaaaaaccatggcttcgatttctccgtcggctggcataaacagttcagcaaaaaactg
aaactgaacgtcaccggtacactcaccacctacaaaaacgaaatcatgaaaatcgccgac
ggagtagactacttcgacggcgacagccgccgcttcgatggcagcaacatcatccgcaac
gcggtagggcaaccggtttcctccttcttcggctaccagatcgatggcttctggaacagc
gccaaagaagtgaccgacgccgacgataaagtgaaaaaagccaccaacgatccggaagct
ttctaccaggaaggcgccggcatgggccgcttccgctataaagacgtcaacggcgacggc
cgcatcaccccggatgaccgtaccttcctcggtaatcccaaccccgactttacctacggt
atcaacatcggtataaactaccagcacttcgatttcaatatcttcctcttcggtacccac
ggcaaccagatctggaataacgtacgctggtggcgcgatttctattcgtcttttgaaagc
gccaaaagcaaaacagccctgtacgactcctggcgtcccgaccaccagaacgccaaagcg
cctatccaggaagtggacggctctgtcagcacacaaggcgttcccaactcttacatggtg
gaaaatggcgcctacctgcgtgctaaaaacgtaacactcggctatacgttgcccgctggt
tcactgtcacgcctacacgtacagaagttccgggtatacgtccaggcagccaacctgttc
accatcaccaaatactccggtatagatcctgaaatcggcggttccaacatcaccgacttc
ggcgtggacgaaggcgcttatcccaaccagcgccagttcctcatcggggtgaacctggcc
ttttaa
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