Chitinophaga oryzae: HF329_06895
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Entry
HF329_06895 CDS
T07451
Name
(GenBank) fibronectin type III domain-containing protein
Organism
coy
Chitinophaga oryzae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
PA14
Cadherin_5
He_PIG
GLEYA
Por_Secre_tail
Peptidase_S9
Abhydrolase_2
CshA_repeat
PKD_4
Glyco_hydro_39_C
DLH
FlgD_ig
PAF-AH_p_II
fn3_2
Motif
Other DBs
NCBI-ProteinID:
QJB31040
LinkDB
All DBs
Position
complement(1650329..1657078)
Genome browser
AA seq
2249 aa
AA seq
DB search
MRKIYSLVTLFMLISTQFLMAQTGVLNPNDPVVDYNSSAPPTQPAWNQVGKWVRTKRVSF
NTTSYKAYIYNGMQFRLKWPKNYDSTKTYPIIIFFHGLGEKGTIYDNEYSLYHGGELFMN
AVDNGTTNAFLFYPQNLSGYFGPSYYDYIVDLLNKYFIPQLHVDPYRIFVHGLSGGGTAT
WDFIQRNPKLVAGSTPISAATSDLANTINSWKYTPIWWFQGGVDNNPPPSVTQSVYNQAI
AAGANIKLKIFDGMGHGVWYNAWQSPGYFDFINALYKSNPWPLFGRTEFCVNDPINVTLG
LTAGFNNYEWRKDGTVIPGATSNTLNVTAIGTYDARVYNGTSWSDWSHTPVVIKIKTATV
SPAIQTAGLMSNVIPTPEGKDSVVLQVPAGYASYLWKKSTDNTTLGTNNTYAAKQAGDYL
VKVTEQYGCSSDFSDPFHVVAANGANGPDAIFALQAAAVSRTQITLNWSNKTNPAYNETA
FEVYRTITPGTGYALVAKVDADVLTYTDNNLVPNTKYYYIIRPVNNNGAAPVSSEVNATT
MVDSQPPTAPTNLTVTGTTRSSVALSWTQSTDDVGVDKYDIYINGAKSYTVNSDQNTFLV
GGLTARTVYAFTVKARDITGNVSNASNQVSAATLSKGLNYQYYTGTFSTLPNFNTLTPVK
TGNSATVDLSVRTQDVNYAILWQGYINIPATGSYKFETNSDDGSKLYIGTYSPTATALVN
NDGLHGSQYASGTINLTKGSYPITISYFQQGGGASMQIYWTSTAANINSRTVIPASAFID
TMTIGSTPAPTTNVKATALSFNKIKVTWTDNSTNETGFEIYRSESQVGPFDIVATTAANA
TAYTDSLLAPETTYYYQVRAINRNGNAGSSLSDISGLKYDYYEAASYTTLPAFTETPVKS
GITSAVTLDMRNRDANYAIKYSGYINIPTTGLYTFYTASDDGSRLYIDGFGTTYMLVNNN
YVQSTTERASVPKTLSAGKHQFYVTYFQGSGGQELHARWSGPGIAKQEIPASAFEDNDIK
ATTLALPPVPTAPSGLNATAVSPNVIKLKWNDNSAAETGFDIYRSVNNNSNYVLLTTIGR
SDSAYAVYSDTALTANTSFYYKIKAKNEGGISGFSNEATATTLNSVPVFAALTDKKMRFD
GQLNVPISATDADGDALTITTANLPAFGALAVAGNGTGNITFTPSISDVGTYNNIQVTVA
DGHGGNVTRSFNLVVDNNYPPVLSNISNVALAEKGTNTVTITATDANTTDALTWDVTNLP
AFATLTTNGGSATIALAPGYGDNGNYPVTVTVSDGNGGSDTKTFTISVTAVNPNYSVYVN
FNDGTYKAPAPWNNTNKAQPALNDVFANLLDQTGRNTGISMKVMTNWQTVNGGANTNNFG
YTTNNNSGIYPDAAMVSAWFTMADKQTLKLSGMDTAYTYSFTFFGSRAGVTDPRVAGYTV
NGTTVSLNASSNTGTTVTASGIRANSDSTITVDLTALNGSAYAYLNTMVIQANYDNGKPP
AKPGNLTARSLPAGVRLNWTDRAYNETGYEVYRANAQSGPYQLLSPVANVNDTAYTDPNV
SGNHTYYYVVRAINANGGNPSDTVSINLPNMPPAIDSIGNVAMKTDAIVNVNIRATDDPA
DVITITATGMPSFATLQNTGNGTATLRLAPTSTNIGTFSIVINAKDDKGAQSSRTFKVQV
TDKNMTSVYVNYNRIEPAPAPWNNFNSPANANTTISNIPDETGTASGISVTLLDALTGDN
NIGAVTGNNTGVFPDVVMHTFYYDQSGQAKRIRISGLSATLKYNLVFFGSREAVSDNRNT
IYSAGGQSVTLNAASNTQNTVQINGLSADASGNIDFTLQQASGSFAGYLGAMVIQSYVDN
GIPLAPANLVTSNQTSSSIQLNWADKSSNETGFEVWRSTEREGTYTKLTTTAANVTTYTN
TGLAANSLYFYKVRAITATKQSDYSNIAAGGTLAYGVNINFNTVNPAPAPWNNTNALPYL
NQTMVNPKDGNGNATSFSWTIIDNFTGTNPAGYQTGNNSGVYPDLVIAESYYVEPGDTAK
MRFDNLDQSKEYSFTFFGSRASGGTRITAYSMNGRTVTLDAYDNSTNTVTLDHLSPDQNG
QMQLVIYTANNTYGYLNALVIKAYPKEATLAQLGGTGTMTTAPKTGATTGATTTGNAATD
VTLSQVYPSPFTSFVNVALTQHGKGSMRMALKLLDLNGRTINVKDLGLVAPGSYQFRMDI
TGRELPQGVYLLQVLADNQMVKTVKLVKQ
NT seq
6750 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaaatctactctctggtcacactgttcatgctgataagcacgcagttcctgatg
gcgcaaaccggcgtcctcaaccccaatgatcccgtggtggactataactcctccgccccg
cccacacagccagcctggaaccaggtaggcaaatgggtgaggaccaaacgggtgagtttc
aataccacgtcctacaaggcgtacatttacaacgggatgcagtttcgcctgaagtggccg
aaaaactatgattccaccaaaacttatcctatcatcattttcttccatggacttggtgaa
aaaggcaccatctatgataacgaatactctttgtatcatggtggagaattgttcatgaac
gcagtagacaacggcaccaccaacgccttcctgttttatccccagaatctttccggatac
tttggtcccagctactatgattacatcgtggacctgctgaacaaatatttcatcccccaa
ttgcacgttgacccataccgtattttcgtacatggtctttccggcggcggtactgccacc
tgggactttatccagcgcaatcctaaactggtagccggatctacaccaatcagcgccgct
accagcgacctcgccaataccatcaacagctggaaatacacccccatctggtggttccag
ggaggtgttgacaacaatccaccaccatccgtaacacaatctgtctacaatcaggccatc
gccgccggcgctaatatcaagctgaagatcttcgatggcatgggacatggtgtatggtac
aatgcgtggcagtcaccgggctacttcgactttattaatgcgctttataaatccaatccc
tggccgctctttggcaggacggagttttgcgtgaatgaccccattaacgtaacgcttggt
cttaccgccggtttcaataattatgagtggcgtaaggatggtactgttatccccggcgct
acctccaataccctgaatgtgacagccatcggtacctatgacgccagggtatacaacggc
accagctggtcagactggtcgcacacccctgtggtgatcaagatcaagaccgccactgtg
agccctgccatccaaaccgcgggcctgatgagcaacgtgattccgaccccggaaggtaaa
gacagcgtagtgctgcaggtacctgccggttacgccagctatctctggaaaaaatcaacc
gacaatactaccctcggtaccaacaatacctatgcggcaaaacaagccggtgattacctg
gtgaaagtaacagagcaatacggctgttccagcgacttctcagatccgttccacgtagta
gccgccaacggcgccaatggcccggatgctatttttgccctccaggcagccgccgtctcc
agaacacagatcaccctgaactggagcaataaaacgaacccggcttacaacgaaacagct
tttgaagtataccgcaccattacccccggcacaggttatgcactggtcgctaaagtggat
gccgacgtgctgacctataccgataataacttagtgccgaacacgaagtactattatatc
atccggcccgttaacaacaacggcgccgccccggtgagcagcgaggtaaacgctaccacc
atggtagacagccagcctcctaccgctcccaccaatcttaccgttaccggtaccacccgc
agctctgtggcgctttcctggacacagtccacagacgatgtaggcgttgacaaatacgac
atctatatcaatggcgccaagtcttataccgttaacagcgatcagaacaccttcctcgta
ggcggactgactgccagaacagtatatgccttcaccgtaaaagcccgtgatatcaccggc
aacgtgtccaatgccagcaaccaggtaagtgcagccaccctgtccaaaggattgaactac
cagtattataccggcaccttcagcacgctgccgaactttaatacactgacgcccgttaag
acaggcaactccgccactgtggacctttccgtaagaacccaggatgtcaactacgcgatc
ctctggcaaggctacatcaatatccctgctaccggcagctataagttcgaaaccaactcc
gatgacggcagcaagctgtatatcggcacctatagcccaaccgctacagcgctggtcaat
aatgatggcctgcacggttcccagtatgccagcggcaccattaacctgaccaaaggctcc
taccctatcaccatcagctacttccagcagggtggcggcgccagcatgcagatatactgg
accagtaccgcagccaatatcaacagcagaacggtcatccccgcatctgcctttattgat
accatgactattggcagcaccccggcaccaacgaccaacgtaaaagcgaccgccttatct
ttcaataagatcaaagtaacctggaccgacaacagcaccaatgaaaccgggtttgaaata
tatcgttccgaaagccaggtaggtccgttcgacatcgtagcaacaaccgctgctaacgct
accgcctatacggatagcctgcttgcaccggaaaccacctattactaccaggtacgggcc
atcaaccgcaacggtaatgccggttccagcctttctgacatcagcggcctgaaatacgac
tactacgaagccgccagctacactacgctgcctgcctttactgaaacacccgtaaaatca
ggcattacctccgcagtaacgctggacatgcgtaaccgtgatgccaactatgccatcaaa
tactccggctacatcaatatccctaccacaggcctgtatactttctataccgcctccgac
gatggcagccgcctgtatattgacggtttcggcaccacctacatgctggtcaataacaac
tatgtacaaagcactaccgaacgcgcgtctgtgccgaaaacactttcggccggcaaacac
cagttctatgtgacctacttccagggcagcggcggacaggaactgcacgcccgctggtcc
ggaccaggcatcgctaaacaggagatccctgccagcgcgtttgaagacaatgatatcaaa
gctactacactggcattaccgccggtgcccacagcaccgtccggcctgaacgctaccgct
gtatcacctaatgtcattaaactgaagtggaacgacaactccgctgctgaaaccggcttt
gacatctaccgctccgtcaataacaacagcaattatgtgttgctgaccaccatcggccgc
agcgacagcgcatatgcagtctacagcgacactgcgctcactgccaacacatcgttctat
tacaagataaaagcgaaaaacgaaggcggcatcagtggattctcaaatgaggccactgcg
accaccctcaactctgtacctgtcttcgcagcgctgaccgacaagaaaatgcgtttcgac
ggtcagctgaatgtgcccattagcgctaccgatgccgatggcgatgcactgaccatcacc
accgccaatctgccggccttcggcgcactggcggtcgccggcaacggtactggcaatatt
accttcaccccatccatcagtgacgtaggtacctataacaacatacaggtaaccgtggcc
gacggacacggcggcaacgttacccggtcattcaacctggtggtagacaacaactaccca
ccggtgctgagcaacatctccaatgtggccctcgcggaaaaaggcactaacaccgttacc
attacggctaccgatgccaataccaccgatgcgcttacctgggatgtgaccaacctgccc
gctttcgccacactcactaccaacggcggcagcgccaccatcgcattggccccgggctac
ggcgacaacggcaactaccctgttaccgtgaccgtatctgacggcaacggcggatcagac
actaaaacatttaccatcagcgtgactgctgtaaacccgaactacagcgtatatgtcaac
ttcaacgacggcacctacaaagcgcccgcaccatggaacaacaccaataaagcgcaaccg
gcgctgaacgatgtgttcgccaacctgctggaccagaccggacgcaataccggtatctcc
atgaaggtgatgaccaactggcaaaccgtgaacggcggcgccaataccaacaacttcggc
tataccaccaacaacaactccggtatctatcctgatgccgcgatggttagcgcatggttc
accatggcagataaacaaaccctcaagctgagcggaatggatactgcctacacttactcc
ttcaccttcttcggaagccgtgccggcgtaacagatccgcgtgtggctggctataccgtc
aacggtactactgtaagtctcaatgcttccagcaataccggcactactgttaccgccagc
ggtatcagggccaacagtgacagcaccattacagtggatcttactgcactcaatggttcc
gcctacgcttacctcaacacgatggtgatacaggccaactacgacaacggtaaaccgccg
gccaaacccggcaatcttaccgcccgcagcctgcccgccggcgtgagactgaactggaca
gacagggcctataatgaaacaggttatgaagtataccgcgccaatgcgcaaagcggccct
tatcagctgctgagcccagtggccaatgtgaacgataccgcctatacagacccgaatgta
tccggtaatcacacctattattacgtggtacgtgccatcaacgccaatggcggcaatcct
tccgataccgtcagcatcaacctgcccaacatgccgcctgctatcgacagcatcggcaac
gtggccatgaagacagatgccatcgtgaacgtgaacattcgcgctaccgatgatccggca
gacgtgatcaccattactgcaaccggcatgccttccttcgccaccctgcagaataccggc
aacggtaccgctacgctgagactggcgcccaccagcaccaacatcggcacattcagcatc
gtgatcaatgctaaagatgataaaggcgcccaaagcagccgtaccttcaaggtacaggtc
accgataaaaacatgacgtccgtatacgtgaactataaccgtatagaacccgcaccggcg
ccatggaacaacttcaacagcccggcaaacgccaacaccaccatctctaacatccccgat
gaaaccggtactgccagcggtatcagcgttaccctgctggacgcgctcaccggcgacaat
aatattggcgcagtgaccggcaacaacaccggcgtattcccggacgtggtgatgcatacc
ttctattacgaccagagcggtcaggcaaaacgcatcaggatcagcggcctgtctgcaacg
cttaaatacaacctggtattcttcggcagccgtgaagctgtcagcgataaccgcaatacc
atctatagcgccggcggacagtcagtcaccctgaatgctgccagcaatacacagaatacc
gtacagatcaacggcctcagcgcggacgccagcggaaacatcgacttcaccctgcaacag
gcttccggctccttcgccggctacctcggcgccatggtaatacagtcttatgttgacaac
ggcataccactggctccggccaacctggtgaccagcaaccaaacctccagcagcatccag
ctcaactgggccgacaagtccagcaacgaaaccgggttcgaggtatggcgttctactgaa
cgcgagggtacttataccaagctgaccaccaccgcagccaacgtaacgacctacaccaac
accggtctggcggccaacagcctctacttctataaagtacgggccatcaccgccaccaaa
cagtctgattacagcaatatcgccgccggcggtacactcgcctacggcgtcaacatcaac
ttcaacaccgtcaacccggcaccggcgccatggaacaacaccaacgcgctgccatacctg
aaccagacgatggtcaacccgaaagacggcaacggtaacgctaccagcttcagctggacc
atcatagacaactttaccggcaccaacccggcagggtaccaaaccggcaacaacagtggc
gtataccccgacctggtgatcgcagaatcctactacgttgagcctggcgataccgccaaa
atgcggttcgacaacctcgatcagtccaaggaatactccttcaccttcttcggaagccgc
gccagcggtggcaccaggatcaccgcctacagcatgaacggcagaacagtaacgctggat
gcttatgataacagcaccaataccgttacactcgaccacctgtcacccgaccagaacggt
cagatgcagctggtgatctataccgccaataacacttacggctatctgaacgccctcgtg
atcaaagcttacccgaaagaggcaacactggcccagctcggcggtaccggcaccatgaca
acggcgccaaaaaccggcgcaacgaccggcgctaccaccaccggtaacgcagcaaccgac
gtaacactgtcccaggtatatccgagccccttcaccagcttcgtgaacgtagcgctcacc
cagcacggtaaaggcagcatgcggatggcactgaaactgctggacctcaacggacgcacc
atcaacgtaaaagacctcggcctggtagcccccggctcctatcagttcagaatggacatc
accggacgtgaactgccacagggcgtctacctcctgcaggtactggcggacaaccaaatg
gtgaaaacagtcaaactggtgaaacaatag
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