Caminibacter pacificus: C6V80_06240
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Entry
C6V80_06240 CDS
T06023
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cpaf
Caminibacter pacificus
Brite
KEGG Orthology (KO) [BR:
cpaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpaf03400
]
C6V80_06240
DNA repair and recombination proteins [BR:
cpaf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C6V80_06240
Archaeal homologous recombinant proteins
C6V80_06240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
ABC_tran
T2SSE
AAA_16
FlaC_arch
RsgA_GTPase
AAA_19
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
QCI28574
LinkDB
All DBs
Position
complement(1171341..1173947)
Genome browser
AA seq
868 aa
AA seq
DB search
MNLEKLRIKNINSFEGEFEIDFEKFKNELFLISGPTGAGKSTIIDAILAALYDKTPRLSA
SKYLLNEDAKEGIIELCFSVQGDRYRINWSVKRNKKGEIGNVKRVLYKNDELLADKRADI
LKELLKVIKLDFNEFTKSIVLAQGEFDAFLSAGDSEKAKVLERILNVKEFELISIKVYEK
AKSLAEEIALIRRDIENIGEIGDLKDKEKEFKGVQKLAEKLSLELKEIEEKLEKKKKKES
LVKENEEILEKLKKTRTAMENHQKELEDLDFSKKERDFLLQKEKILKDVESLDIAVTLLV
ELQNKNSLLNSKKAELEILQKELEELEKIEENLKNELEKKEIENSSIEIVDDERLKNFEN
LQEIYLKLLNLREEYKKKLTLKKKYENEIEEKKELERKIQKEIKDLEEKEAYLKAKILVL
EYEEKRRDLKENEPCPLCGSTIHPYVKNPPKISEEIKNEYQKVKMELETKQKELEKVKKE
IYLIDDRIKNLGLNEILSEGKRLREEFEKFGIKEEEFDKLKAIKEKNDKNRELKTKLQIE
ITKLKANLESVVKEKAQKNKKIEDIKKEMQVIQKEMEKIKNDKNFDFSAKEKKEKLKKEL
SELESEFEKTKEKHNFLSSEIKKLKALKEEYENRIEKNKKEISSIEDVDIDESVKLKKSE
ELNEINKKIGLLSAEISEIERKQAQKEAFEKELKEKSEKYKVIEKLNGAIGSAKGDKFKK
IAINFLLESLLSVANMHLERITNGRYLFEKSDDLQKLSLYIVDRFYENKKREVSTLSGGE
KFLASLALSFGLSDMVRDKVDIEVMFLDEGFGTLDNDSLYRALNILKEASRGKSVGIISH
VDSLKEEITKQIKVIKKPNGRSEIVIKA
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggaaaagttgaggattaaaaatataaactcttttgagggggagtttgaaata
gattttgagaagtttaaaaacgagctttttttgatttcaggtcctaccggtgccgggaaa
agtacgataatcgatgctattttagcggctctttatgataaaactccaagactctcagcc
tcaaagtatcttttaaacgaagacgcaaaagaggggattatcgagctttgtttttcagtt
cagggtgataggtataggataaattggagtgtaaaaagaaacaaaaaaggcgaaatcgga
aatgtaaaaagagtactttataaaaacgatgagcttttagcggataaaagagcggatatt
ttaaaagagcttttgaaagttataaagcttgattttaacgaattcactaaatctatagtt
ttagctcaaggtgaattcgatgcgtttttgagtgcgggagatagtgaaaaagctaaagtt
ttggagaggatattaaacgtaaaagagttcgagcttatttcgataaaagtgtatgaaaaa
gcaaaaagtcttgcagaagaaatcgcgctgattcgaagagatatcgaaaatattggtgaa
ataggcgatttgaaagataaagaaaaagagtttaaaggcgtacaaaaacttgctgaaaaa
ttgagtttggagttaaaagagattgaagaaaagctcgaaaagaaaaagaaaaaagaatct
cttgtaaaagaaaacgaagaaattttggaaaaactgaaaaagacccgaacggctatggaa
aatcatcaaaaagagcttgaagatttggatttttcaaaaaaagagcgggattttcttttg
caaaaagagaaaattttaaaagacgtggaatctcttgatattgcggtaacactcttagta
gagcttcaaaataaaaattctttattgaattccaaaaaagctgaattggaaattttacaa
aaagagttggaggagttggaaaaaatagaagaaaacttaaaaaacgagcttgaaaaaaaa
gagattgaaaacagttcgattgagattgttgatgatgagagattaaaaaatttcgaaaac
cttcaagagatatatttaaagcttttgaatttaagagaggaatacaaaaaaaaactgact
ttaaagaaaaaatatgaaaacgaaatagaagaaaaaaaggaattggaaagaaaaatccaa
aaagagataaaagacttggaagaaaaagaagcttatttaaaagctaagatattggttttg
gagtatgaagaaaaaagaagagatttaaaagaaaacgagccgtgtccgctttgcggaagt
acgattcatccgtatgttaaaaaccctccgaaaataagcgaagagataaaaaacgagtat
caaaaggtgaaaatggagcttgaaacaaaacaaaaagagcttgaaaaggtaaaaaaagag
atttatttgattgatgataggataaaaaatttaggtttaaatgagatattaagtgagggc
aaaaggcttagagaagagtttgagaaattcggaattaaagaagaggagtttgacaaacta
aaagcgataaaagaaaaaaacgataaaaacagagaattaaaaactaaactccaaatagaa
attacaaaactaaaagcgaacttggaatccgtagttaaagaaaaggcgcaaaaaaataaa
aaaattgaagatataaaaaaagagatgcaagttattcaaaaagagatggaaaaaattaaa
aatgacaaaaatttcgatttttcggcaaaagagaaaaaagaaaaattaaaaaaagagctt
agcgaattggaaagtgaatttgaaaaaacaaaagaaaagcataattttttatcaagcgaa
ataaaaaaattgaaagctttaaaagaggagtatgaaaacagaatagaaaaaaacaaaaaa
gagatttcttcgattgaagatgtggatattgatgagagtgttaagcttaaaaaaagtgag
gagttgaacgaaataaataaaaaaatagggcttttaagtgccgaaatttcggagatagaa
agaaagcaagcacaaaaagaagcttttgaaaaagagcttaaagaaaaaagcgaaaaatat
aaagttatcgaaaaactaaacggcgcaataggctcggcaaaaggagataagtttaaaaaa
atagcgattaactttttattggagtctttattgagcgttgcgaatatgcatcttgagagg
attacaaacggaaggtatctttttgaaaagagcgatgatttgcaaaaattgagtttgtat
atcgtcgataggttttatgaaaataaaaaaagagaagtttcgactttaagcggaggtgag
aagtttttggcttctttggctcttagtttcgggcttagcgatatggtaagggataaagtg
gatattgaagttatgtttttggatgagggattcgggacgcttgataacgatagtctttat
agggctttgaatattttaaaagaggcgagtagaggaaaaagcgtcggaattatttcgcac
gtcgatagtctgaaagaagagataacaaagcaaatcaaagttattaaaaaacctaacggc
agaagtgagatagtgataaaggcttaa
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