Carica papaya (papaya): 110809717
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Entry
110809717 CDS
T05151
Name
(RefSeq) uncharacterized protein LOC110809717
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110809717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpap03021
]
110809717
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110809717
Transcription machinery [BR:
cpap03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
110809717
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
110809717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_2
zf_UBZ
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
110809717
NCBI-ProteinID:
XP_021891310
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MPINNMRNASLNVHGIRSVGDLAIKKPNSAIDARVQSGYGVSGEVRPVLQHNGSNLEPPA
LPSTMPLNAFHGVGPVGGQTIKKASSAINDRVLSNTIVFVQNQSHSASVNVMESNIAPVA
VQGYGADMSKIIGSKGTPVTPVSSTNQYVLNDGFFNLINSLTPNTSIPLPEEKQKETQLP
NSVESILQGLVCSVSPQIAPGVSQYLSSNHFSNLVSSLAAEGLVNISEEQPKQTPEVNKQ
EEKSEGVLDFNPEFLKTRHESVIRALYADIPRQCSACGQRFKSQEKHRNHMDWHVRKNRM
KNNSNLKRKQASKTKPSRNWFASERLWLNAASGEETDNKTMIELLNGKNVVEKKDGDKEF
IVPADEDQKICALCREEFENFFSDEADDWMYKGAVYANVAKGKARAGMDRHKLGPIVHAK
CMPETKKVTAEDFRGSSHVTSSKVAVC
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgccgattaacaatatgagaaacgcttctttgaatgttcatggaatcagatctgttggt
gacttggcaatcaagaaaccgaactctgcaattgatgctagggttcaatcaggctatggt
gtttcgggcgaagttaggcctgtgctgcaacataatggttcaaatttggaacctcctgct
ttgccgtcaactatgccacttaacgcttttcatggcgttggacctgttggtggccagaca
atcaagaaagcaagctctgcaattaacgatagggttctgtctaatacaatagtcttcgtg
caaaatcaaagtcatagtgcttctgtgaatgtaatggaatcaaatattgcgcctgtggct
gttcaaggttatggggctgatatgagtaaaataattggatcaaaaggaacaccagttaca
cctgtttcgtcaactaatcagtatgtattgaatgatggattcttcaatttgattaactct
ttgacaccaaatacttcaattcctctaccagaagagaaacagaaagaaacccagttgcca
aattcagtagagtcaattttgcaaggtctggtttgttctgtttcaccacaaatagcgcca
ggagttagccaatatctctcgagtaatcacttctctaatttggttagttctttggctgct
gaaggattggttaatatatcagaagaacagccaaaacaaacccctgaagtgaacaagcag
gaagaaaaatctgaaggagtacttgattttaatccagagtttctaaaaacaagacatgaa
tctgtaatccgtgctctctatgctgatattccaagacaatgttcagcctgcggacaacgg
ttcaagagccaagaaaaacataggaaccatatggattggcatgttaggaagaaccgaatg
aaaaacaactcaaacttgaagcggaagcaagcttcgaagacgaagccttcgcgtaattgg
tttgcaagtgaacgtttgtggctgaacgctgcatcgggagaggaaacagacaataaaaca
atgattgagttgttgaatggtaaaaatgttgtggaaaagaaagatggtgacaaagagttt
atagttcctgcagacgaggatcagaagatatgtgcactgtgccgtgaggaatttgagaat
ttcttcagtgatgaagctgatgattggatgtacaaaggagctgtgtatgcgaacgtggcc
aagggaaaagcaagagccggcatggataggcataagttaggtcccatagtgcacgccaag
tgtatgcctgagactaagaaggttactgctgaagatttcagaggatcatctcatgttact
tcttctaaagttgctgtatgttaa
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