Carica papaya (papaya): 110816429
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Entry
110816429 CDS
T05151
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110816429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpap03019
]
110816429
03036 Chromosome and associated proteins [BR:
cpap03036
]
110816429
Messenger RNA biogenesis [BR:
cpap03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110816429
Chromosome and associated proteins [BR:
cpap03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110816429
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
110816429
NCBI-ProteinID:
XP_021900312
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MFGSSNPFGQSSTSPFGSQTVFGQTNASNNPFAPKPFGSTSPFGAQTGTSMFGGTSTGVF
GAAQSSSPFSSTTAFGASSSPAFGSSMPSFGASSTPAFGASSSSFGGSSVFGQKPGFGFG
ATTQSSPFGSTTQQSQPGFGSSIFGSSTPFGASSQPAFGTTSTPAFGATSTPAFGATSTP
AFGAASTSAFGATSTPAFGATSTPAFGSTPSPGFGSTGTGFGVSSTPVFGSGGAFGASSI
AAFGAASTSAFGVSSAPAFGASTTSVFGASSTPAFGASSTPSFSFGSAPAFGQSTSSFGG
SMFGSTSSPFGAQSSPFGAQATTPTFGSSGFGQSGFGGQRGGSRVAPYTPTTEADSGSGT
QPAGKLESISAMPVYKDKSHEELRWEDYQQGDKGGPLPAGQSPAGVGFGTSTAQANPFAP
SPAFGQSSPSPFTSSTSSNPFAPKTPGFGSSGFGTSTTPAFGSSPFGATSSSNLFGSTSS
TTTSLFGSTPAFGGSSSIFGSSSSPVFGSSPSLFGSAASQGTAPAFGSGMGFGTSQTSPL
FNSTVPSIGQTASGFGQVTSSFGQGSTPSFGQSSIFNTPSTGFGGLFTSSSTVNTSSSPI
FGQTAASVSTPFQPGQPAQATSTFGFGNFGQTQAASGSGFGGGLGIFGQSNIGQMPAAQS
AAAVQPVVVTNPFGTLPVMPQMSIGRTGMSPSIQYGISNMPVVDKPAPVRISSLLTSRHI
SQRRIRLPARKYRPNDGPKVPFFDDDEETPSTPKADALFIPRENPRALVIRPTEQWPSRA
SAEKSSPLKDTTLVHENGKISENGSAAGNKDKHPVEDGAVAFVHPIKMNQKLNGVHDDHP
PQKENSYMTLSGHRAGEAAIVYEHGADIEALMPKLRRSDYYTEPKIQELAAKERAEPGFC
RRVSDFVVGRHGYGSIKFTGDTDVRRLDLESLVQFNNREVIVYMDDSKKPPVGQGLNKPA
EVTLLNIKCFDKKTGQQYTEGPKVEKYKEMLKRKAEEQGAEYVSYDPIKGEWKFRVKHFS
KYKVDDDGDDSDEDLECCIGLC
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgtttggatcatctaatccgtttgggcagtcatctactagcccgttcgggtctcaaaca
gtctttggtcagactaatgctagtaacaatccttttgcccctaaaccgtttggtagtaca
tctcctttcggcgcacaaacaggtacttcaatgtttgggggcacttcaactggtgtgttt
ggcgctgctcaatcctcttcacctttttcttccacaacagcctttggggcttcatcgtca
ccagcttttggaagttccatgccctcgtttggagcatcttcaactcctgcttttggcgct
tcatcttcgtcatttggtggctcatctgtttttggtcaaaagcctggttttggttttggg
gcaacaactcaatcaagtccttttggaagtacaactcagcaatcacaacctggatttgga
agcagtatatttggttcttccacaccttttggtgcatcaagtcagcctgcatttggtact
acaagcactccagcattcggtgctacaagcactccagcattcggtgctacaagcactcca
gcattcggggctgcaagcacctctgcgttcggtgctacaagtacacctgcctttggtgct
acaagcacacctgcatttggctcaacaccgagcccaggatttggtagtacaggaactgga
tttggtgtgtcaagtacccctgtttttggatctgggggtgcatttggtgcttcaagcatc
gctgcatttggtgcagcaagtacttctgcttttggggtgtcaagtgctcctgcttttggg
gcttcaaccacgtctgtttttggggcttcaagtacgcctgcttttggagcatccagcact
ccatcctttagctttggctctgctccagcttttggccagtcaacttcatcctttggcggc
agcatgtttggatccacatcctctccttttggtgctcagagttctccttttggagctcaa
gctacaacaccaacatttgggagcagcggctttggacaatcaggttttgggggtcaacgt
ggaggaagtagggtagccccttacacacctacaactgaggcagatagcggtagtggtaca
cagcctgctgggaagttggagtcaatatcagccatgcctgtctacaaagataaaagccat
gaggagttgaggtgggaggattatcagcagggagataaaggtggaccactccctgctggc
cagtctccggctggagttggcttcggtacatcaactgctcaggcaaatccttttgctcct
tcaccagcatttggtcagtcatcaccaagtccttttacaagctcaacatcttcaaatcca
tttgctccaaaaactccaggttttggtagctcaggttttgggacctcaaccactcctgca
ttcggttcatcaccttttggtgcaacatcgtcatcaaacttatttggatcaacttcatca
acaactacatcgctatttggatctactcctgcatttggaggaagttcatctatttttggt
tcatcaagctcacctgtatttgggtcttctccatctctttttggttctgctgcaagtcaa
gggacagctccagcatttggttctggcatgggttttggtactagtcagacatctcctctg
ttcaattcaactgttccttcaattgggcagacagcatctggtttcggacaggttacttcg
tcctttggacagggttctactccttcatttggtcagtccagtatcttcaatacaccttct
accgggtttggtgggttattcacaagctcatcaacagttaacacttctagcagcccaatt
tttggtcaaacagcagcctctgtttctacaccttttcagccaggccagcctgctcaggcc
actagcacgtttggctttggcaactttggtcagacacaagcagcaagtggaagtggcttt
ggcggtggattgggcatttttggtcaaagcaacattggacaaatgccagctgcacagagc
gctgctgctgtacaaccggttgttgttacaaatccatttgggacgcttcctgttatgcct
caaatgtcgattggtcgaactggaatgtcgccatcaatacaatatggaatttctaatatg
cctgttgtcgacaaacctgctcctgttagaatatcatctttattgacttctcgacacatt
tcgcaaaggcgaatcaggttgcctgcaaggaagtatcgtcctaatgatggtccaaaggtt
ccattttttgatgatgatgaagagacacccagcactcccaaggcagatgctctttttatt
ccaagggaaaacccaagagctctggtgattcgtccaacagaacagtggccttcaagagct
agtgcagaaaaatcatctccgttgaaggacactaccctggtgcatgaaaacggtaaaatt
tctgaaaatggatctgctgctggcaacaaagacaaacatccagttgaagatggtgctgtc
gcttttgttcatcccatcaaaatgaatcaaaagcttaatggtgttcatgatgatcatcct
cctcagaaagaaaattcatacatgactcttagcggccacagagcaggtgaagctgctata
gtgtacgaacatggggctgacatcgaggccctgatgccaaagctccgacgctctgattac
tatacagaacctaaaatccaagaacttgcagccaaggaaagggctgagccgggattctgt
cgccgtgttagtgactttgtagttggacgtcatggctatgggagcatcaaattcactggt
gatacagatgtgcgaaggctcgatctggaatctctggtgcaatttaacaaccgtgaggta
attgtttatatggatgacagcaagaagccccctgtcggacaaggtcttaacaagcctgcc
gaagtaactctacttaacataaagtgttttgataagaagaccggacaacaatacacagaa
ggaccaaaagttgaaaaatacaaggagatgcttaagaggaaggctgaggaacaaggcgct
gagtatgtgtcctatgatcccatcaaaggagaatggaagttcagagtcaagcatttcagt
aagtacaaggtggatgatgatggtgatgacagtgatgaggatcttgaatgttgcattggg
ctttgttga
DBGET
integrated database retrieval system
