Carica papaya (papaya): 110819215
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Entry
110819215 CDS
T05151
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cpap
Carica papaya (papaya)
Pathway
cpap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110819215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpap03041
]
110819215
Spliceosome [BR:
cpap03041
]
Common components
Common spliceosomal components
SR proteins
110819215
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_7
Motif
Other DBs
NCBI-GeneID:
110819215
NCBI-ProteinID:
XP_021904029
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MSSRSSRTLYVGNLPGDIRESEIEDLFIKYGPITTIDLKIPPRPPGYAFVEFAEARDAED
AIRGRDGYDFDGHRLRVELAHGGRGRSSIDRHSSYGGGRGRGPSRRSDYRVLVTGLPSSA
SWQDLKDHMRQAGDVCFSQVFRDGSGTTGIVDYTNYEDMKYAIKKLDDSEFRNAFSRAYV
RVREYDSRRDYSRSPSRGRSYSKGRSESRSRSRSRGRSYSRSRSKSKSPKAKSSRRTPAR
SRSRTASPRSRSRSRSLSRSRSRSRSPLPSRQKGASKSPKKRSLSRSPSGSRSRSKSLSR
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgttcgagcagaactctctatgttgggaatctccctggtgatattcgagag
agtgaaatagaggatttgtttattaagtatggacctataactaccattgacctgaagatc
ccgccaaggcccccgggctatgcatttgttgagtttgcagaagctagggatgctgaagat
gcaattcgtggtcgcgatggctatgattttgatgggcatcggctacgggtggagcttgca
catggtggtcgtgggcgttcatcaatagatcgtcacagtagttatggtggtggtcgtgga
cgtggaccatccagacgctccgattatcgtgtgttagttacagggttaccttcttcagct
tcgtggcaagaccttaaggatcatatgcgccaagcaggggatgtctgtttttcccaagtc
ttccgtgatggtagtgggacaacaggaattgtggactacacaaactatgaagatatgaaa
tatgcaataaaaaagcttgatgactccgagtttcgaaatgcattttctcgagcatatgtt
cgggtcagggaatatgattcgaggcgagactactctaggagtcctagtcgtggtcgatcc
tactcaaaaggtcggagtgaaagccgcagccgcagccgcagtcgtggtcgaagttatagt
cggagcaggagcaagagcaaatccccgaaagccaaatcttcgcgtcgcacaccagccagg
tctagatcaaggactgcttcgcctcgttcgcggtcgcgttcacgtagtctgtctagatct
cgatcaagatccagatctcccctgccttctcgtcagaaaggagccagtaaaagccccaaa
aagagaagtttgagcaggagccctagtggtagcaggagcaggagcaagagtttgtcccgg
tga
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