Clostridium perfringens 13: CPE2412 Help Entry CPE2412           CDS       T00074                                  Name (GenBank) RNA polymerase beta' subunit   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism cpe  Clostridium perfringens 13 Pathway cpe03020   RNA polymerase Brite KEGG Orthology (KO) [BR:cpe00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     CPE2412  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cpe03021]     CPE2412    03400 DNA repair and recombination proteins [BR:cpe03400]     CPE2412 Enzymes [BR:cpe01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      CPE2412 Transcription machinery [BR:cpe03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      CPE2412 DNA repair and recombination proteins [BR:cpe03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       CPE2412 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Apocytochr_F_C RPOC_hybrid Motif Other DBs NCBI-ProteinID:  BAB82118 UniProt:  P0C2E8 LinkDB All DBs Position complement(2758152..2761688) Genome browser AA seq 1178 aa AA seqDB search MFELNNFDALQIGLASPEQIREWSRGEVKKPETINYRTLKPERDGLFCERIFGPIKDWEC HCGKYKRVRYKGIVCDRCGVEVTKSKVRRERMAHIELAAPVSHIWYFKGIPSRMGLILDM SPRALEKVLYFASYIVIDPKETSLLKKQLLNEKEYREACDKYGEESFVAGMGAEAIKTLL SEIDLERTAAELKEELKQSTGQKKVRIIRRLEVVESFKSSGNKPEWMVVDVIPVIPPDLR PMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNG RRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPK EMALELFKPFVMKKLVEDGVAHNIKSAKRMVERVMPQVWDVLEEVIADHPVLLNRAPTLH RLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAAGNI MKPSDGRPVCVPTQDMVLGSYYLTMDKDGAKGEGKYFASFDEVIMAYQLKEVDIHAKINV KVTKEIDGELKSGIIKTTPGFIIFNECIPQDLGFVNRENPEEMFNLEIDFLITKKSLGKI IDKCYLKHGPTKTSIMLDNIKATGYHYSSIGAVTVAASDMIVPQKKYELLKEADETVDKI EKMYRRGLISEDERYERVIEKWTETTEEVADTLMNSLDKFNPIFMMADSGARGSKSQIKQ LAGMRGLMASPSGKIIELPIRASFREGLDVLEYFISTHGARKGNADTALKTADSGYLTRR LVDVSQDVIVREHDCGTQNGIYVEEIKEGSEVVEQLAERLTGRYTAEDVFHPETGELLAA KDTYMDPILAEKIADTGIQKVKIRSVFTCDSKVGVCTKCYGMNMATSYKINIGEAVGIVA AQSIGEPGTQLTMRTFHTGGVAGADITQGLPRVEELFEARKPKGLAIVSEVAGTVRIEET KKKRTVYVVTDSGEEYSYDIPFGSRLKVKDGIAIGAGDEITEGSVNPHDIMSIKGVDGAR EYLLSEVQKVYRLQGVDINDKHLEVVVRQMTRKIKVTEQGDTNLLPGVMIDMFDFRAENE RVESFGGEKAQGDIVLLGITKAALATDSFLSAASFQETTRVLTDAAIKGKIDPLVGLKEN VIIGKLIPAGTGMMKYRSLKLNTENSNQETETIIEIEE NT seq 3537 nt NT seq  +upstreamnt  +downstreamnt ttgttcgaattaaataattttgatgctttacaaatcgggttagcatctccagaacaaatt agagagtggtctagaggagaagtaaagaaacctgaaactattaactatagaacgttaaaa cctgagagagacggattattctgtgaaagaatattcggacctataaaagactgggaatgt cactgtggaaaatacaaaagagttagatataaaggtattgtatgtgacagatgtggtgtt gaagtaactaaatctaaagttagaagagagagaatggctcacattgaattagctgcgcca gtatctcatatatggtatttcaaaggaataccttcaagaatgggattaatccttgatatg tcaccaagagctttagaaaaagttctatattttgcatcatatatagttatagatccaaaa gaaacttcattattaaagaaacaacttcttaatgagaaagaatatagagaagcgtgtgat aaatatggtgaagagagctttgtagctggaatgggtgcagaagctataaaaactttatta tcagaaatagacttagaaagaactgctgctgaacttaaagaagaattaaagcaaagcaca ggtcaaaagaaagttagaataataagaagattagaagttgtagaatcattcaaatcatca ggaaataaacctgaatggatggtagtagatgtaataccagttataccacctgatttaaga cctatggttcaattagatggaggtagatttgctacttcagatttaaatgatttatacaga agagttataaatagaaataacagacttaagaagttattagaccttggcgctcctgacata atagttagaaacgaaaagagaatgcttcaagaggctgtagatgctttaatagataacggt agaagaggaagacctgtaactggtcctggaaacagacctcttaaatcattatcagatatg cttaaaggtaagcaaggaagattcagacaaaaccttcttggtaagagggttgactattca ggaagatcagttatcgttgttggtcctgaattaaaaatgtatcaatgtggtcttccaaaa gaaatggctttagaattattcaagcctttcgttatgaagaaattagttgaagacggagtt gctcataacataaagagtgctaagagaatggttgaaagagtaatgccacaagtatgggat gtacttgaagaagttatagcagaccatccagtattactaaacagagcacctactctacat agactaggtattcaagcattccaaccagtattagttgaaggtagagctataaaacttcat ccacttgtatgtacagcatacaacgctgacttcgatggagaccaaatggctgttcacgta cctttatcagttgaagctcaagcagaagctagattcttaatgcttgcagcaggtaatata atgaaaccttctgatggtagaccagtttgtgtacctactcaggatatggttcttggttca tattacttaacaatggataaagacggagctaaaggtgaaggaaaatactttgcatcattt gatgaagtaataatggcttaccaattaaaagaagttgatattcatgctaagattaacgtt aaagttactaaagaaatagatggagagcttaagtcaggaataatcaaaacaactccagga tttataatattcaatgaatgtatacctcaagacttaggttttgtaaatagagaaaatcct gaagaaatgttcaatttagaaatagatttcttaataactaaaaagtcattaggaaaaata atagataaatgttacttaaagcatggtccaactaagacttcaataatgcttgataacata aaagcaacaggatatcattattcatcaattggagctgttacagttgctgcttcagatatg atagttcctcaaaagaaatatgagctattaaaagaagctgatgaaactgtagataagatc gaaaaaatgtatagaagaggtcttatatctgaagatgaaagatatgaaagagttatagaa aaatggactgagactactgaggaagttgcggatacattaatgaatagtttggataaattt aacccaatattcatgatggcagactcaggagccagaggatctaagtcacagatcaaacag ttagctggtatgagaggacttatggcgagtccatcaggtaaaatcatcgagttaccaatc agagcatcatttagagaaggtcttgacgtattagagtacttcatatctactcacggagct agaaaaggtaacgccgatacagcacttaagactgctgactcaggttacttaacaagaaga cttgttgacgtaagccaagatgttatagtaagagaacacgactgtggaactcaaaatggt atttacgttgaagaaataaaagaaggttcagaagtagttgaacaattagctgaaagatta acaggaagatatactgcagaagatgttttccatccagaaactggagaacttttagctgca aaagatacttacatggatccaattttagctgaaaaaatagctgacactggaattcaaaaa gtaaaaataagatcagtatttacatgtgattctaaggttggagtatgtactaagtgttat ggtatgaacatggcaacatcatataaaattaatattggtgaagctgttggtatcgtagct gctcagtcaatcggagaaccaggaacacagcttacaatgagaacattccatacaggtgga gttgctggagcagatataactcaaggtcttccaagggttgaagagttattcgaagcaaga aaaccaaaaggattagcaattgtaagtgaagttgcaggtactgtaagaatagaagaaact aagaagaagagaacagtttatgttgttactgattcaggagaagaatatagctatgacata ccatttggatcaagattaaaagttaaagatggtatagctattggagctggagatgaaata acagaaggttcagttaacccacatgatatcatgagcattaagggtgttgatggtgcaaga gaatacttactttcagaagttcaaaaagtttacagacttcaaggggttgatatcaacgat aagcacttagaagttgtagttagacaaatgactagaaagataaaagtaacagagcaaggt gatactaatttattaccaggtgtaatgattgatatgttcgatttcagagctgaaaatgaa agagttgaaagctttggaggagaaaaagctcaaggagatatagttcttcttggtattact aaagcagctcttgctacagatagtttcttatcagcagcatcattccaagaaacaacaaga gttcttactgatgcagcaattaaaggaaaaattgatcctcttgttggattaaaagaaaat gttataattggtaagttaattccagcaggtacaggtatgatgaagtatagatcattaaaa ttaaatactgaaaacagtaatcaagagactgaaacaataattgagattgaagaataa

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