Chaetura pelagica (chimney swift): 104385744
Help
Entry
104385744 CDS
T08631
Symbol
USP47
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 47
KO
K11857
ubiquitin carboxyl-terminal hydrolase 47 [EC:
3.4.19.12
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpea01002
]
104385744 (USP47)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpea04121
]
104385744 (USP47)
Enzymes [BR:
cpea01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104385744 (USP47)
Peptidases and inhibitors [BR:
cpea01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104385744 (USP47)
Ubiquitin system [BR:
cpea04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104385744 (USP47)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
USP47_C
UCH
UCH_1
Ubiquitin_2
ubiquitin
Sad1_UNC
Motif
Other DBs
NCBI-GeneID:
104385744
NCBI-ProteinID:
XP_009992540
LinkDB
All DBs
Position
Unknown
AA seq
1374 aa
AA seq
DB search
MKDFVSINCLLXDMFWSCRQSIFAEMKKKFSQVESAAEEPRVLCIIQDTTNSKTVNERVT
LNLPASTPLKRLFEDVSSKVGYVNGSFDLVWGNGDNVTDTTPIDQNSDKTILDAGFEPGK
KNFLHLIDKDGEQPHVMPEETGTTDDSAQDRFIGPLPREGSVGCTNDYVSQSYSYSSVLS
KSETGYVGLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFV
LLQTSKKRAIETTDVTRSFGWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINQLY
QGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPETLDGPNQ
YFCERCKKKCDARKGLRFLHFPYLLTLQLKRFDFDYTTMHRIKLNDRMTFPEELDMSVFI
DVEDEKSPQTESCTDSGAENEGSCHSDQMSNDFSNDDGVDEGICLESNSAAERISKAGSE
KSSLLYELFSVMVHSGSAAGGHYYACIKSFSDDQWYSFNDQHVSKITQEDIKKTYGGSSG
SRGYYSSAFASSTNAYMLIYRLKDPTRNAKFLEAHEYPEHIKQLVQKERELEEQEKRQRE
IERNTCKIKLFCMHPTKQIMMENKLEVHKDRTLKEAVEIAYKLMDLEEAVPLDCCRLVKY
DEFHDYLERSYEGEEDTPMGLLLGGVKSTYMFDLLLETRRPDQIFQCYKPGEVMVKVHVV
DLKTESVAPPISVRAYLNQTVSEFKQLISKATHLPAETMRVVLERCYNDLRLLNISSKTL
KAEGFFRSNKVFIESSESSDRHVVYTDSHLWKLLDRHANTIRLYVSLPEQSPGSQLRRAI
YHKPSGDSGNLDETCERVKGPVGNMKSVEAILEESTEKLKSLSLQQQQEGDNGDSSKSTE
ASDFENIESPLNEIDSSASAENRELENQIQISDPENLQSEERSDSDVNNDRSTSSVDSDI
LSSSHSSDTLCNVDNAPLPLANGLDSHSITSSRRSKANQGKKETWDTAEEDSGTDSEYDE
SGKSRGEAQYMYFKSEPYTADEGSGEGQKWLMVHVDKRITLSAFKQHLEPFVGVPSSHFK
VFRVYASNQEFESVRLNETLSSFSDDNKITIRLGRALKKGEYRVKVYQLLVNEPEPCKFL
LDAVFAKGMTVRQSKEELLPQLREQCGLDLTIDRFRLRKKTWKNPGTVFLDYHIYEEDIN
ISSNWEVFLEILDGVEKMKSMSQLAVLSRRWRPSEMKLDSFQEVVLESSSVEELKEKLSE
ISGIPLENIEFAKGRGTFPCDISILEIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDKT
EELMELTDEQRNELMKKESSRLQKTGHRVTYSPRKEKALKIYLDGAPNKDLTQD
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattttgttagcattaattgtttattataggatatgttttggagttgcagacaa
agtatctttgctgaaatgaagaagaaattttcacaggtggaaagtgctgctgaggaaccc
agggtgctttgtataatacaagataccacaaattccaagacagttaatgagcgtgttacc
ttgaacctgccagcttccacaccacttaaaaggctgtttgaagatgtgtcttcaaaagtg
ggctacgtgaatggaagttttgatttagtgtggggaaatggagataatgtaactgatacg
acaccaatagatcagaacagtgacaaaactattcttgatgctggttttgagccaggaaag
aagaactttctgcatttgatagacaaagacggtgagcagcctcatgtaatgccggaggag
acaggtacaacagatgacagtgcacaagacagatttataggccctcttccaagagaaggc
tcggttggctgtaccaatgactatgtcagtcaaagctactcttattcttccgtcctgagc
aaatcggagacaggttatgtgggtctagtaaatcaagcaatgacttgctacttgaacagc
cttctacaaacacttttcatgactcctgaatttagaaatgcgttatataaatgggaattt
gaagaatctgaagaggatcctgtgacgagtatcccctaccagcttcaaagactgtttgtt
ttactgcagacgagcaaaaaaagagcaattgaaacaacagatgttacacggagttttgga
tgggatagtagtgaggcatggcagcaacatgatgtacaggagctatgtagagtcatgttt
gatgctttggagcagaaatggaagcaaacagaacaggccgatcttataaaccaactgtac
caaggcaaactgaaggactatgtaagatgtctagaatgtggctacgaaggctggagaatt
gacacttacctggatattcctttggtcatccggccgtatggctccaaccaggcgtttgct
agcgtggaagaagcactgcatgctttcattcagcctgagactcttgatggccccaaccag
tatttttgtgaacgatgtaagaagaaatgtgatgcaaggaagggtctgaggttcttgcat
tttccctatctgctgacattacagctgaagagatttgactttgattataccactatgcac
agaattaaactcaatgatcgtatgacttttcctgaagagttggacatgagtgtcttcatt
gatgttgaagatgagaagtctcctcagacggagagttgcacagatagtggtgctgaaaat
gaaggcagttgtcacagtgatcagatgagcaatgatttttctaatgatgatggagttgat
gaaggaatctgccttgaaagcaatagtgcagcagaaagaatttctaaagctggcagtgaa
aagagttctttactgtatgagctgttttctgttatggttcattctggtagtgctgctggt
ggccattattatgcctgtataaaatctttcagtgacgaccagtggtacagctttaatgat
caacatgttagcaagataactcaggaagatattaagaaaacatatggtggatcttctgga
agcagaggctattattccagtgcttttgctagctccacaaatgcatacatgctgatatat
agactgaaggatccaacaagaaatgcaaagtttcttgaggcacatgagtacccagagcat
attaaacaattggtacagaaagagagagaactggaagaacaagagaagaggcaacgtgaa
attgagcgcaacacttgcaagattaaattgttctgcatgcatcctacaaaacaaataatg
atggagaacaaactagaagttcacaaggacaggacactcaaggaagctgtggaaatagct
tacaagctgatggatttagaagaggcagttcctttggattgctgtcgtcttgtcaaatat
gatgagtttcatgactacttggaacgatcatatgaaggagaagaggatacaccaatgggt
ttattacttggaggtgtcaaatcgacctacatgtttgacttactgttggaaacaagaaga
cctgaccaaatcttccagtgctataaacctggtgaagtcatggtaaaggttcatgtggtt
gacctaaagactgaatctgttgctcctccaataagtgtacgagcttatttgaatcaaaca
gtttcagaatttaaacagctaatttcaaaggccacgcacctgcctgctgaaacaatgcga
gtggtattagaacgttgctacaatgacttgcgtcttctgaacatttccagcaaaacactg
aaagctgaaggcttttttagaagcaacaaggtatttattgaaagctcagagtcttcagat
cgccatgtggtttatacagattctcatttatggaaacttttggatcgtcatgccaataca
atcagactgtatgtttcattaccagagcaatcacctggatctcagttaagacgagcaatt
tatcataagcctagtggagattcaggcaacttggatgaaacctgtgaaagagtaaaagga
cctgtaggtaatatgaaatctgtggaggcaattctggaagaaagcaccgaaaagctgaag
agcttgtccctgcagcagcagcaggagggggataatggagacagcagcaaaagcacagaa
gccagcgattttgaaaacattgaatcacctttaaatgaaatagactcttcagcatcagca
gaaaacagagaacttgaaaaccaaattcagatttctgatccagaaaatctccagtctgag
gaacggtcagattcagacgtaaataatgacaggagtacaagttcagtggacagtgacatc
ctgagctccagtcacagcagcgatactttatgcaatgtggacaatgccccacttcccttg
gctaatggacttgattctcatagtatcacaagtagtaggcgatcaaaagcaaatcagggg
aagaaagaaacctgggacacagcagaagaagattctggaacagatagtgaatatgatgaa
agtggcaagagcagaggagaagcacaatatatgtattttaagtcagaaccgtacactgca
gatgaaggttcaggagaagggcaaaaatggctgatggtgcatgttgataaaagaattaca
ctgtctgccttcaagcaacatttggagccttttgttggagttccatcttctcacttcaaa
gtctttagagtctacgccagcaaccaagagtttgagagtgttcggctgaatgagacactt
tcatcattttctgatgacaataagataactattagacttggaagagcccttaagaagggt
gaatacagagtcaaagtctatcaacttttggtaaatgagccagagccatgcaagtttctt
ctagatgcagtttttgctaaaggaatgactgttcggcagtcaaaagaggagctacttcct
cagcttcgagaacagtgtggcctagacttgacaattgacaggtttcgcctacgaaagaaa
acctggaagaacccaggcactgtgtttctggattatcatatctatgaagaagatatcaat
atttcaagcaactgggaggtcttcttagaaatacttgatggagtagaaaagatgaaatcc
atgtcacaacttgctgttttatcaagacgatggaggccatcagagatgaaactggattct
ttccaggaagtagtgctagaaagcagcagtgttgaagaactaaaagagaagctaagtgaa
ataagtggaatacccttagaaaacatagaatttgcaaagggcagaggaacatttccgtgt
gacatttccatactagaaattcaccaagatttggactggaatcctaaagtatctacattg
aatgtctggcctctgtacatttgtgatgatggtgcagtaatattttatagggataaaact
gaagaattaatggaattaacagatgaacagagaaatgaactgatgaaaaaagaaagcagc
agactccagaaaactggacaccgggtaacctactctccccgtaaagaaaaagcactaaaa
atttatctggacggagcaccaaataaagatttgactcaagactga
DBGET
integrated database retrieval system
