Chaetura pelagica (chimney swift): 104386828
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Entry
104386828 CDS
T08631
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpea03041
]
104386828 (RBFOX1)
Spliceosome [BR:
cpea03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
104386828 (RBFOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
SPESP1
Motif
Other DBs
NCBI-GeneID:
104386828
NCBI-ProteinID:
XP_009993798
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MLSSQGVLLHPYGVPMILPAAPYFAGLVQGNQEATAPPDTMAQPYASAQFAPPQNGIPAE
YTAPHPHPAPDYTGQTTVPEHTLNMYPPAQTHSEQSAPDTNAQTVSGTATQTDDAAQTDG
QQQTQSSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF
VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYS
PEFYAGRVLLCQANQEGSPVYSAPSSLVYTSTMPGFPYPAATAAAAYRGAHLRGRGRTVY
NTFRAAAPPPPIPAYGGVVYQDGFYGADIYGGYAAYRYAQPATATAAAYSDSYGRVYAAD
PYHHTLAPAATYGVGAVNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgtctcaaggagttttgctacatccatatggagtgccaatgattctgccggca
gcaccatacttcgctggacttgttcagggtaatcaggaagctacagcacctcctgacaca
atggcacagccttatgcctcagcccagtttgctccacctcagaatggtatccctgcagaa
tacacagccccacatcctcatccagctccagactacacaggccaaaccactgttccagag
cacacgttaaacatgtaccctcctgctcagacacactctgaacagagtgcacctgacaca
aatgcacaaactgtctccggcacagccacacagacagatgatgcagcacagaccgatggc
cagcaacagacacaatcttctgaaaacacagaaaacaaatcacagccaaaacggcttcac
gtctcaaatataccattcaggttccgggacccagatcttagacaaatgtttggtcaattt
ggtaaaatcttagatgttgaaattatttttaatgagagaggctcaaagggatttggtttc
gtaactttcgaaaatagtgctgatgcggacagggcgagggagaaattacacggcaccgtg
gtagagggccgtaaaatcgaggtaaataatgcaacagcacgtgtaatgacaaataaaaag
accgtcaacccttacacgaatggctggaaattaaatccagttgttggtgcagtttatagt
ccagaattctatgcaggcagggtgctgctgtgccaggcaaaccaggagggatctcccgtg
tacagtgcccccagttcactagtatacacatccacaatgccaggattcccctaccctgct
gcaacagcagctgctgcttacagaggtgcacacctaagaggccgaggtcgcacggtgtac
aacacgttccgggcagcagcaccccctcctcccatcccagcctacggcggtgttgtatac
caggatggattttatggtgcagacatttatggtggttatgctgcctaccggtatgcccag
cctgccactgccactgcagctgcctacagtgacagttacggacgagtttatgctgcagac
ccctaccaccacacacttgctccagcagccacctacggcgttggtgccgtgaatgctttt
gcacccttgactgatgccaagactaggagccatgctgatgatgtcggtctcgttctttct
tcattacaggctagtatataccgagggggatacagccgttttgctccatactaa
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