Chaetura pelagica (chimney swift): 104390677
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Entry
104390677 CDS
T08631
Symbol
SAMHD1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03250
Viral life cycle - HIV-1
cpea04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104390677 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
104390677 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpea03400
]
104390677 (SAMHD1)
DNA repair and recombination proteins [BR:
cpea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104390677 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
BDHCT
Motif
Other DBs
NCBI-GeneID:
104390677
NCBI-ProteinID:
XP_009998162
LinkDB
All DBs
Position
Unknown
AA seq
548 aa
AA seq
DB search
MDSMDNKQEELAVMVQQENLPAERLKVLACLNDLRQQRLDVMKVFNDPIHGHIEIHPLLV
RIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSIGVGYLAGLLVRTLKERQPELDITQ
RDILCVEIAGLCHDLGHGPFSHMFDGRFIPLARPGLKWKHETASVEMFEHLVTSNKLEEV
MRSYGLVLEEDFNFIKEQIGGPIDEAACEKSWPYRGRPKEKSFLYDIVANKKNGIDVDKL
DYFARDCHHLGIPNNFDYNRYLKFTRVCEVNSQKHICTRDKEAGNLYDMFHERHWLHRRA
YQHKTGNIIEIMITEAFQKADKFFKIEGSGGKQYHISTAMEDMEAYTKLTDNIYLEILHS
NRPELKEAREILHKIERRELYKYLGETQPETMEGIGKSNNLGEDIANSKPEKDPPDVEVK
AEDFIVDVINIDYGMKEQNPIDKVHFYTKADPSKAVNIRREQVSKFLPVTFSEQVIRVYY
KSQDPVILSAAKQYFIQWCMKNDFTKPQDGDVVAPHLTPMKKSWNNMRDDGHRTGSEPSC
KQRLSFDK
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatggacaacaagcaggaggagctggcagtcatggtgcagcaggaaaacctc
ccagctgagagactgaaagtgctggcctgcctgaacgacctgagacagcagcgcctagac
gtgatgaaggtttttaacgatccaattcatgggcacattgaaatacatccccttctggtc
cggatcatcgacacacctcagtttcagcgcctcagatacattaagcagctgggtgggact
tactttgtttttccaggagcctctcacaaccgctttgaacactccataggggtgggctac
ctagcagggcttctggtccgtacactgaaggagagacaaccagaactggatataacccag
cgagatatcctttgtgtagaaattgctgggctttgtcatgatttgggtcacgggccattt
tctcacatgtttgatggaagatttattccacttgctcgtccaggtttgaagtggaagcat
gaaactgcttctgttgaaatgtttgagcacctggttacttccaataaactagaagaagtc
atgaggtcatatggtcttgtcctggaagaagattttaactttatcaaggaacaaatagga
gggcctatagatgaagcagcttgtgagaaatcatggccctaccgtggtcggccaaaggag
aagagtttcctctatgacatagtagccaacaaaaaaaatggcatcgatgttgacaaattg
gattattttgcaagggattgccatcacctaggaatcccaaacaattttgattataaccga
taccttaaattcacacgggtgtgcgaagtgaacagccagaagcacatctgtacccgtgac
aaggaagctgggaatttgtatgatatgttccacgaacggcattggctgcaccggcgagcg
taccagcataagactggcaacatcattgaaataatgattacggaagcctttcaaaaagca
gacaaattttttaaaatagaaggctctggaggaaagcagtaccacatttctacagcaatg
gaggacatggaagcctacactaagctaactgataatatctacctggaaattctgcactca
aatcgtccagaactgaaggaggcacgagaaattttgcataaaatagaacgtcgggaatta
tacaagtatttaggagagactcaacctgaaacaatggagggaattggaaagagtaataac
ctgggagaagacattgctaattccaagccagaaaaggatcctccagatgtggaggtaaag
gctgaagatttcatagtggatgttatcaatatagattatggaatgaaagaacagaatccc
attgacaaagttcacttctacactaaggctgatccttccaaagcagtcaacatccgcaga
gaacaggtttcaaagtttcttcccgtcacgttttcagagcaggttatccgggtttattac
aaaagtcaggatccagttattctttcagctgcaaaacagtattttattcagtggtgcatg
aagaatgatttcaccaaaccacaggatggtgatgtggttgcccctcatctgactccaatg
aagaaaagctggaataacatgagagatgatggacacagaacaggttcagagcccagctgt
aaacaaaggctttcttttgataagtaa
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