Chaetura pelagica (chimney swift): 104392813
Help
Entry
104392813 CDS
T08631
Symbol
PRPF40A
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A
KO
K12821
pre-mRNA-processing factor 40
Organism
cpea
Chaetura pelagica (chimney swift)
Pathway
cpea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104392813 (PRPF40A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpea03041
]
104392813 (PRPF40A)
Spliceosome [BR:
cpea03041
]
Complex A
U1 snRNP components
U1 related factors
104392813 (PRPF40A)
Complex B
104392813 (PRPF40A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
Motif
Other DBs
NCBI-GeneID:
104392813
NCBI-ProteinID:
XP_010000550
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MIKAEENSVKPDDSTPTTAASAAEATNTTTTATTAAETAAAATTTTAAAAAPAASEGESA
AASSGAENENSGTATAEEQGQAASAPAGQDQSGEAAANAADDSSKQEASGDAASKKEDED
AQPVKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQA
FNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAIS
ERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYCTTWSEAQQYLMDN
PTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQLFLDE
LHEHGQLHSMSSWMELYPTISSDIRFTNMLGQPGSTALDLFKFYVEDLKARYHDEKKIIK
DILKDKGFVVEVNTSFEDFVTVISSTKRATTLDAGNIKLAFNSLLEKAEAREREREKEEA
RKMKRKESAFKSMLKQATPPIELDAVWEDIRDRFVKEPAFEDITLESERKRIFKDFMHVL
EHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESEDDDSHSKKKRQRSESRSASERSSSA
ESERSYKKSKKHKKKSKKRRHKSDSPESDVEREKDKKERERDGEKDRARQRSESKHKSPT
KKRPGKDSGDWDTSGSELSEGELEKQRRTLLEQLDEDQ
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgattaaagctgaagaaaacagcgtcaagcctgacgactccactcccacaacggctgct
tcagctgctgaggcaacaaacacaaccaccacagccaccactgctgctgaaacagctgca
gctgcgaccaccaccactgctgctgctgcagcaccagcagcctcggaaggggaatctgct
gcagcctcttctggggcagaaaacgagaattctggcacggcaacggctgaggagcaggga
caagcagcttctgcacctgctgggcaggaccagagtggagaagctgcagctaatgcagca
gatgactcttccaagcaagaggcctcaggagatgctgcttcaaagaaggaggatgaagat
gcccaaccagttaaaaaaacctacacctggaatacaaaggaagaagcaaagcaagcattt
aaagagctgttaaaagaaaagcgagtaccgtccaatgcttcttgggagcaagctatgaaa
atgatcattaatgatcctagatacagtgctttggcaaaattaagtgaaaaaaagcaagcc
tttaatgcttacaaagttcaaacagagaaagaagagaaagaagaagcaagatccaaatac
aaagaagctaaggaatccttccagcgtttccttgaaaaccatgagaagatgacatccact
acaagatacaaaaaagctgaacaaatgtttggggagatggaagtctggaatgcaatctct
gagcgtgaccgtcttgaaatttatgaagatgtcttgtttttcctgtctaagaaagaaaag
gaacaagccaaacagttaaggaagaggaactgggaagctctgaagaacatactagataat
atggctaatgtcacttactgtactacttggtcagaggctcagcagtatctgatggacaat
cctacatttgcagaagatgaggaacttcagaacatggataaggaggatgcgctgatctgt
ttcgaggaacatatcagggcactggaaaaagaggaggaagaagaaaaacagaagagtttg
cttagagaaaggaggcggcagcgcaagaacagagaatccttccagctatttttagatgag
ctgcacgagcatggccaactacattccatgtcctcttggatggagttgtacccaaccatc
agctctgacatcagattcaccaacatgcttggtcaacctggatcaacagcacttgatctt
ttcaagttctatgttgaagacttgaaggcacgttaccatgatgaaaagaagataataaag
gatatcttaaaggataaagggtttgtggtggaagtcaatacatcttttgaagattttgtt
acggtcatcagttcaactaaaagagctactactttagatgcaggaaatatcaagctggct
ttcaacagtctgctagaaaaggcagaagcccgtgagagagagagagaaaaagaagaagct
cgcaagatgaagaggaaggagtctgccttcaagagcatgttgaaacaagctactcctccc
attgagctggatgctgtctgggaagatatcagagatagatttgtgaaggaaccagcattt
gaagacatcactctggagtctgaaagaaaaagaatatttaaagatttcatgcatgtacta
gagcacgagtgtcagcatcatcactccaagaacaagaaacattctaagaagtccaaaaag
catcacaggaagcgatcgcgttcccgctcgggctcagagtctgaggacgacgacagccat
tccaagaagaaaaggcaacgttcagaatccagatcggcctcggagcgttcttccagcgca
gaatccgagagaagttacaagaagtcgaaaaaacacaagaaaaagagcaagaagagaaga
cataagtctgattcaccagagtcagatgttgagcgagaaaaagacaaaaaagaaagagag
agagatggtgagaaggacagagcaagacagagatctgaatcaaagcataaatctcctact
aaaaagcggcctggaaaagattctggggactgggacacctctggcagtgagctgagcgag
ggggagttggaaaagcagaggaggactcttttggaacaactggatgaagatcaatga
DBGET
integrated database retrieval system
