Chaetura pelagica (chimney swift): 104393407
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Entry
104393407 CDS
T08631
Symbol
KDM1A
Name
(RefSeq) lysine-specific histone demethylase 1A
KO
K11450
[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:
1.14.99.66
]
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpea03036
]
104393407 (KDM1A)
Enzymes [BR:
cpea01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.99 Miscellaneous
1.14.99.66 [histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase
104393407 (KDM1A)
Chromosome and associated proteins [BR:
cpea03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
BRAF-HDAC complex
104393407 (KDM1A)
REST complex
104393407 (KDM1A)
Histone demethylases
104393407 (KDM1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Amino_oxidase
SWIRM
NAD_binding_8
DAO
Pyr_redox_2
AlaDh_PNT_C
Pyr_redox
FAD_binding_2
HI0933_like
FAD_oxidored
FAD_binding_3
Thi4
Pyr_redox_3
2-Hacid_dh_C
DUF6827
Sec10_N
GIDA
MurD-like_N
Lycopene_cycl
IlvN
CdiI_2
Motif
Other DBs
NCBI-GeneID:
104393407
NCBI-ProteinID:
XP_010001199
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MDESLANLSEDEYYSEEERNAKAEKEKKLPPPPPPVPAEEENESEPEEPSGQAGGLQDDN
SGGYGDGQASGVEGAAFQSRLPHDRMTSQEAACFPDIISGPQQTQKVFLYIRNRTLQLWL
DNPKIQLTFEATIQQLEAPYNSDTVLVHRVHSYLERHGLINFGIYKRVKPLPTKKTGKVI
IIGSGVSGLAAARQLQSFGMDVTVLEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPM
AVVSKQVNMELAKIKQKCPLYEANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLN
NKPVSLGQALEVVIQLQEKHVKDEQIEHWKKIVKTQEELKDLLNKMVNLKEKIKELHQQY
KEASEVKPPRDITAEFLVKSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLS
SRDRQILDWHFANLEFANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGL
DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPP
LPEWKTSAVQRMGFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPI
LLALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYS
YVAAGSSGNDYDLMAQPITPGPAIPGAPQPIPRLFFAGEHTIRNYPATVHGALLSGLREA
GRIADQFLGAMYTLPRQPTPGIPPQQATNM
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaagtcttgcaaacctgtcggaagatgagtattactctgaagaagagagaaac
gctaaagctgagaaagagaaaaaactaccaccaccacctccaccggttcctgcagaagaa
gagaatgaaagtgagccagaggagccatctgggcaagcaggaggacttcaagacgacaat
tctggagggtatggagacggccaagcatcaggtgtggagggtgcagctttccagagtaga
cttccacatgaccgcatgacatctcaagaagctgcctgcttccctgatataatcagtggg
ccacagcagactcagaaggtgtttctgtacatcaggaaccgaacactgcagctctggttg
gataacccaaagattcagttgacatttgaggcaactatccaacaattagaggcaccttat
aatagtgatacggtgcttgtccacagagtgcacagctacttggagcgtcatggtctaatc
aactttggtatctacaaaagagtgaagccccttccaaccaagaagactggaaaggtgatc
attattggttctggagtctctggattggcagcagctcgccagttgcagagctttgggatg
gatgtcacagtcctggaagccagggaccgagtaggaggaagagttgccacctttcgcaaa
gggaactacgttgctgatctaggagcaatggtggtaacaggactaggaggaaatcccatg
gctgtggtcagcaaacaagtgaatatggaattggctaagatcaaacaaaaatgcccactt
tatgaagcaaatggacaagctgttccaaaagagaaagacgaaatggtggagcaagagttt
aatcgtctgctggaagctacctcttatcttagtcatcagttggattttaatgttctcaat
aataagcctgtctccctcgggcaggctctggaagttgtcatacaattgcaggagaaacat
gtgaaggatgagcagattgaacactggaagaaaattgtgaaaacacaggaggaattgaaa
gatcttcttaacaagatggttaatttaaaagagaagattaaagaacttcaccaacagtat
aaagaagcatcagaagtgaagccacctagggatattaccgcagaattccttgtgaaaagc
aaacacagagatctgaccgcgctttgcaaggagtacgatgaattggcagaaacacaagga
aagctggaggagaagttacaagaacttgaagccaatccaccaagtgatgtttatctgtca
tcaagagacaggcaaatacttgactggcactttgcaaacctagaatttgctaatgctaca
cccctgtctaccctttccctgaagcactgggaccaggatgatgactttgaatttacaggc
agtcacttgactgtgaggaatggatattcctgtgtgcctgtagccttggcagaagggttg
gatattaaattaaacacagcagttcgtcaggttcgctatacagcatcaggatgtgaagtg
atagctgtaaatacccgatctactagccagacttttatttacaaatgtgatgctgtgctc
tgtactcttcccttgggagtattgaaacagcagcctccagcagtacagtttgtgccacct
cttcctgagtggaaaacttctgcagtgcagcggatgggttttggcaaccttaacaaggtc
gtattgtgttttgatcgtgtcttctgggatccaagtgtcaatttgtttggtcatgttggt
agcactacagcaagcagaggagaacttttcctgttttggaacctgtacaaagcaccaatt
ttgttggccttggtagcaggagaagcagcagggatcatggaaaatatcagtgatgatgtc
attgttggacgttgccttgccatcctgaaaggcatatttggtagcagtgctgtgccacag
cctaaagagacggtggtgtcccgctggcgtgccgacccatgggcccggggttcatattcc
tatgtagcagctggatcttctggaaatgattatgatttgatggctcagccaattactcct
gggccagccattccaggtgctcctcagcccatccctcgcctgttttttgcgggagaacac
acgattcgcaactaccccgcgactgttcacggggcgctgctgagcggactgcgagaagcc
ggtcgcattgcagaccaatttcttggggccatgtatactctacctcgccagcctacgcct
gggatccccccacaacaagctacgaatatgtaa
DBGET
integrated database retrieval system
