Chaetura pelagica (chimney swift): 104396984
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Entry
104396984 CDS
T08631
Symbol
TRAPPC8
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
cpea
Chaetura pelagica (chimney swift)
Brite
KEGG Orthology (KO) [BR:
cpea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpea04131
]
104396984 (TRAPPC8)
Membrane trafficking [BR:
cpea04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
104396984 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAPPC-Trs85
SNAP
Motif
Other DBs
NCBI-GeneID:
104396984
NCBI-ProteinID:
XP_010005199
LinkDB
All DBs
Position
Unknown
AA seq
1420 aa
AA seq
DB search
MSPSYCPSVMLVMERVGKLPCNDLWEVHMRDPNNQLHIIKNLKIAVNNIITHPPQPGAIR
KLLNDVVSVSQPAEGLVANVITAGDYDLNISATTPWFESYRECFLQSMPASDHEFLNHYV
ACMLVVSSSEPDPVEQFLKLSQEQHRIQHSSEYLYPKWFIPNTLKYYVLLHDVSTGEEQR
ADSIYEEMKQRYGTQGCYLLKINSRMSNRGTDEQIPDPWSQYLQKNTIQNQDFYDDGPYT
VIANKNTDHLISDGLDSEIKDGLSNNFKTHPLQLDHPSGSLDSTDYMKAAAAAQDVKKPN
SATPHGACLTLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFSATKK
WFSGSKVPEKSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYELAYSCYHTAKKDFL
NDQAMLYAAGALEMAAVSAFLQPGAPRPYPAHYMETAIQTYRDICKNMVLAERCVLLSAE
ILKSQSKYSEAAALLIRLTSEDSDLRSALLLEQAAHCFINMKSPMVRKFAFHMILAGHRF
SKAGQKKHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSFTLRQLDNAVSAFRHILIND
SKQPPAQQGAFLREYLYVYKNVTQLSPDGPLPQLPLPYINSSATRVFFGHDRRPAEGEKQ
AATHVSLDQEYDSESSQQWKELEEQVVSAVNKGMIPSNFQPTQFCLNRYSDNSRFPLAVI
EEPITVEVSFRNPLKVPLLLTDLSLLWKFQPKDFNVKHAGETKELGTGVDDTIGTEAISE
FLINSEETKVARLKLFPHQTGELHILGVVYNLGTVQGAATLDGIDPSIGLQTGKFVSNGL
SVRGRQDLEIQGPRLNNTKEEKTSIKYGPDRRLDPIITEEMPLLEVFFINFPTGLLCGEI
RKAYVEFVNVSKCPLTALKVVSKHPEFFTFGGNTAVLTPLSPSASENCSAYKTVVTDPTS
VHTALLSSASSVDFGVGTGGQPEVINVPLPDAILLPGASVQLPMWLRGPDEEGVHEINFL
FYYESIKKHSKMCHRVLRHTAVICTSRSLHIRATVCRSNALEDEEGRGDNMLVFVDVENI
NTSESGVKEFHIVQVSSNSKHWKLQKSVNISEDKDTKLASRERAKLCFKAVRCKNSEENY
TFADIVFGNEQIISSASPCADFFFQSLSSEFKRMHVQSHTPHASQRAVKQAFDETIRLIQ
RCNEVNLNIVVLWKAYVVEDNKQLILEGQHHVALHTVGKEAFSFPQKQGLKKILGNSDWE
DLEQELPETVLLKFFRPESTPVPTRPTPEQLSNLIKTSLHYPXSFNHSFHQKSLCLVPVT
LLLSNCSHAVVDVMIDLRHKTTSPEALEIHGSFTWLGQTQYKLQLKSQEVYSLQLKACFV
HTGVYNLGTPRVFAKLVDQVTLFETSQQNSMPALIIINNI
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgagccccagctactgccccagtgtcatgctggtgatggagcgtgttggcaaattgcct
tgcaatgacttatgggaagttcacatgagagatcctaataatcagcttcacataattaaa
aatctgaagatcgctgtcaacaatattattactcacccacctcagcctggtgccattcgg
aaacttttgaatgatgttgtgtcagtcagtcagcctgctgaaggactagtagctaatgtg
atcacagctggagattatgatctcaacattagtgctactactccatggtttgagtcctat
agagagtgctttcttcagtccatgcctgcatcagaccatgaattcttaaaccactatgtt
gcatgtatgcttgtagtttcttctagtgaaccagatcctgtggagcaatttctgaagctg
tctcaagaacaacaccgaattcagcatagtagtgaatacttatatcccaagtggtttata
ccaaacacactcaaatactatgtgttactgcatgatgtaagcacaggagaagaacaaaga
gctgactcaatttatgaagagatgaagcagaggtatggaactcagggttgttatttgctg
aaaataaattctcggatgtctaatagaggaacagatgaacagataccagatccttggagt
cagtaccttcagaaaaacactatccagaaccaggatttctatgatgatggtccatatact
gtcattgcaaacaagaataccgatcacttgatatctgatggtttagacagtgaaattaaa
gatggactgtcaaataactttaagactcacccccttcaactggatcatcctagtggcagt
ttggatagcactgattacatgaaggctgctgcagcagcgcaggacgtgaagaaacccaat
tctgcaacgccccatggtgcttgtttaacactcacagatcatgatcgaattagacagttc
atacaggaattcacatttaggggactgttgccacatatagagaagacaattcggcaactt
aatgatcagttaatatccaggaagggcttgagtcgatcactgttttctgctactaaaaag
tggtttagcggcagcaaggttccagagaaaagtataaatgaactgaagaatacttctggt
ttgctgtatccaccagaagcaccagagcttcaaatccggaaaatggcagacttgtgcttt
ttggtgcaacactatgaacttgcatatagctgttaccacacagcaaagaaagacttctta
aatgatcaggcaatgctttatgcagctggagcactggaaatggcagcagtatcagctttt
cttcagcctggagctcctagaccatatcctgctcattatatggaaacagcaattcaaacc
tatcgagatatctgcaagaacatggttttggctgaacgctgtgtgctgcttagtgctgaa
atcttaaaaagtcaaagcaaatattcagaggcagctgctctcctgattcgtttaaccagt
gaggattcagatcttcgcagtgcacttctgttggagcaagcagcccattgctttataaac
atgaaaagtcccatggttagaaagtttgcatttcatatgatattggctggccataggttt
agtaaagcaggacagaagaaacatgcattacgttgctactgtcaagccatgcaggtttac
aaagggaaaggctggtctcttgccgaagaccacattaacttcactattggccgccaatcc
tttacacttcgtcagcttgacaatgctgtgtctgcattcagacatattttgatcaatgac
agtaaacaacctccagctcagcaaggagcttttttaagagagtatctttatgtttataag
aacgtaacccagctgtcacctgatggtcccttaccacagcttcctttgccatatattaac
agctcagcaacccgtgttttctttggccatgatcgaagaccagcagaaggtgaaaagcag
gcagctacacacgtgagtctggatcaggagtatgactcggaatcatcacaacagtggaag
gaacttgaggaacaggttgtttctgcggttaataaaggaatgataccttcaaactttcag
ccaacacagttctgtttaaatcgctactcggataattccagatttccacttgctgttata
gaagaaccaataactgtagaagtgtccttccgaaaccctctgaaagttccccttcttttg
actgatctttcattgctgtggaagtttcaacctaaagacttcaatgtaaaacatgctgga
gaaactaaagagctgggaacgggcgttgatgacacgataggaacagaggcaatatcagaa
tttttaattaatagtgaggagacaaaagtggcaagactaaagctctttccccatcaaaca
ggggagctacatattctgggagtcgtttataatcttggcactgttcagggtgctgcgaca
ttagatgggatagacccttctattggactacagacaggaaagtttgtctccaatggttta
tctgtacgaggacggcaagacttagaaatccaagggcctcgacttaataacacaaaagag
gaaaaaacatctattaaatatgggcctgatcgacgtttagatcccattattacagaggaa
atgcctttgttggaggtgttcttcataaattttcctacagggcttctctgtggagaaatc
agaaaagcatatgtagaatttgtaaatgtaagcaagtgtccccttactgcactgaaagtt
gtgtccaagcatccagaattttttacttttggtggaaatactgctgttctaacgccacta
agtccttcagcttcggaaaactgtagtgcttacaagacagttgtgacagatcctacctct
gtgcatacagcactattatcttcagcttcttctgtagactttggggttgggacaggaggt
cagcctgaagtaataaatgtcccacttcctgatgctattcttcttcctggggcttcagtg
cagctgcctatgtggttacggggaccagacgaagaaggtgttcatgaaattaactttttg
ttttactatgaaagtattaaaaaacactcaaaaatgtgccacagagtattaaggcacact
gcagttatttgtactagccgttctctgcatattcgagctactgtctgcagaagtaatgca
cttgaagatgaagaaggcagaggggacaatatgttggtgtttgtagatgtagaaaatatc
aacactagtgagtctggtgttaaagagtttcatatagtacaagtttcaagtaatagcaag
cattggaagcttcaaaaatctgttaacatctctgaagacaaagatactaaacttgcgagc
agagagcgagcgaagttatgttttaaagcagtaagatgcaaaaactcagaagaaaattac
acatttgcagatattgtctttggaaatgagcagataataagttcagccagtccttgtgca
gacttttttttccaaagcttgtcctccgaatttaaaagaatgcatgtgcagtctcatact
cctcatgcatctcaaagggctgtgaagcaggcatttgatgagacaatcagattgatacaa
agatgcaatgaagtcaatttgaatattgttgtactgtggaaggcatatgttgtggaagac
aacaagcagcttattttggagggccagcatcatgttgctcttcatacagttgggaaggag
gctttttcgtttcctcaaaagcagggtttaaaaaaaatactcgggaattctgattgggag
gacttggaacaggaattgccagaaacagttctcttaaagttttttcgaccagaaagcaca
ccagtacctacaagaccaacaccagagcagctttctaatcttatcaagacaagtcttcat
tatccatagtctttcaatcactctttccatcaaaaaagcctctgtctggtacctgtcact
ctcctactttccaattgttctcatgctgttgtagatgtgatgattgacttgcggcataaa
acaacaagcccagaagcactagaaatccatggatcttttacatggcttggtcaaacacag
tacaagcttcaacttaaaagccaggaagtctatagcttgcagctgaaagcttgctttgtt
catacaggtgtctataatcttggaacaccaagagtatttgccaagctagtggaccaagtt
actttgtttgaaacgagtcagcagaactccatgcctgcactgattattataaataatatc
tga
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